Phocoena sinus (vaquita): 116752271
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Entry
116752271 CDS
T07759
Symbol
SEMA6B
Name
(RefSeq) semaphorin-6B
KO
K06842
semaphorin 6
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
116752271 (SEMA6B)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
LapA_dom
Squash
Motif
Other DBs
NCBI-GeneID:
116752271
NCBI-ProteinID:
XP_032485007
Ensembl:
ENSPSNG00000015536
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Position
3:complement(3579449..3606321)
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AA seq
880 aa
AA seq
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MRTPRAPPPRPALLLLLLLLGGSHGLFPEEPPPLSVAPRDYLNHYPVFVGSGPGHLTPAE
GTDDLNIQRVLRVNRTLFIGDRDNLYRVELEPPTSMELRYQRKLTWRSNPSDINVCRMKG
KQEGECRNFVKVLLLRDESTLFVCGSNAFNPVCANYSMDTLQPLGDNISGMARCPYDPKH
ANVALFSEGMLFTATVTDFLAIDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHVVEWGSH
IYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVPGDSHF
YFNVLRAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDMTQVAAVFEGRFREQKSPES
IWTPVPEDQVPRPRPGCCAAPGMQYNASSAFPDEILNFVKTHPLMDEAVPSLGHAPWIVR
TLMRYQLTRVAVDVGAGPWGNQTVVFLGSEAGTVLKFLVWPNASASGTTGPSVFLEEFET
YRPDRCGRSGGGETGQRLLSLELDAASGGLLAAFPRCVVRVPVARCQQHSGCMKNCIGSQ
DPYCGWAPDGSCIFLSPGTRATFEQDVSGASTSGLGDCTGLLGASLSEERAGLVSVNLLV
TSSVAAFVVGAVVSGFSVGWYVGLRERRELARRKDKEGILAHGGGEAVLSVSRLGERRAG
GPGGRAGGGGGPGVPPEALLAPLMQNGWAKATLLQGGSHDLDSGLLPTPEQTPLPQKRLP
TPHPHALGPRAWEHGHTLLTASLSSSLLLLAPTRAPEAPPAPGEPAPDARLFVARPGRAS
HGDFPLTPHASPDRRRVVSAPTGPSDPSSAADGLPRPWSPPPTGSLRRPGAHAPPAAALR
RTHTINSGEARPRGRHARPGTDLAHLLSYGGPDRTAPPVP
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgcggactccgcgagcgccccctccccgcccggccctactgctcctgctgctgctactg
ggaggctcccacggcctcttccccgaggagccgccgccactcagcgtggcccccagggac
tacctgaaccactatcccgtgttcgtgggcagcgggccaggacacctgacccccgcagag
ggcaccgacgatctcaacatccagcgcgttctgcgggtcaacaggacgctcttcatcggg
gacagggacaacctgtaccgggtggagctggagccccccacgtccatggagctgcggtac
cagcggaagctgacctggcgctccaaccccagcgacatcaacgtgtgtcggatgaagggc
aagcaggagggcgagtgtcgaaattttgtaaaggtgcttctacttcgggacgaatccacc
ctcttcgtgtgtggttccaatgccttcaaccccgtgtgtgccaactacagcatggacaca
ctgcagcccctcggggacaacatcagcggcatggcccgctgcccatacgaccccaaacac
gccaatgttgccctcttctctgaagggatgctcttcacagccaccgttaccgacttccta
gccatcgacgccgtcatctaccgcagcctcggggaccggcccactctgcgcaccgtgaaa
cacgactccaagtggttcaaagagccctactttgtccacgtggtggagtggggcagccac
atctactttttcttccgggagatcgcaatggagtttaactacctggaaaaggtggtggtg
tcccgtgtggcccgggtgtgcaagaatgacgtgggcggctcccctcgcgtgctggagaag
cagtggacgtcgttcctgaaggcacggctcaactgctcggtgccaggggactcccacttc
tacttcaacgtgctgcgggccgtcacgggcgtggtcagcctggggggccggcccgtggtc
cttgctgttttttccacgcccagcaacagcatccccggctcggccgtctgcgcctttgac
atgacacaggtggctgccgtgtttgagggccgcttccgtgagcagaagtcccctgagtcc
atctggacacccgtgccggaggaccaggtgccacggccccggcccgggtgctgtgcagct
cccggcatgcagtacaatgcctccagcgccttcccggacgagatcctcaacttcgtcaag
acacaccccctgatggatgaggcagtgccctcactgggccacgcaccctggattgttcgg
actctgatgcggtaccagctgacgcgagtggccgtggacgtgggcgccggcccctggggc
aaccagactgtcgtcttcctgggttctgaggcgggcactgtcctcaagttccttgtctgg
cccaacgccagtgcctcgggcaccaccgggcccagtgtcttcctggaggagtttgagact
taccggccggacaggtgtggacgctctgggggtggcgagacagggcagcggctgctgagc
ctggagctggatgcggcctcgggtggcctgctggcggccttcccccgctgtgtggtccga
gtgcccgtggcgcgctgccagcaacactcaggatgcatgaagaactgtattggcagtcag
gacccctactgcggctgggccccggatggctcctgcatcttcctcagcccgggcaccaga
gccacctttgagcaggacgtgtccggggccagcacctcaggcttaggggactgcacagga
ctcctaggggccagcctctcggaggagcgcgccgggctggtgtcggtgaacctgctggtg
acgtcgtcggtggcggccttcgtggtgggcgccgtggtgtccggcttcagcgtgggctgg
tacgtggggctccgcgagcggcgcgagctggcccgccgcaaggacaaggagggcatcctg
gcgcacgggggcggcgaggccgtgcttagcgtgagccgcctgggcgagcgccgggcgggc
ggccccgggggccgggccgggggcggcggcgggcccggggttccccccgaggccctgctg
gcgcccctgatgcagaacgggtgggccaaggccacgctgctgcagggcggctcccacgac
ctggactctgggctgctgcccacgcccgagcagacgccgctgccccagaagcgcctgccc
accccgcacccgcacgccctgggccctcgcgcctgggagcacggccacacgctgctcacg
gcctccctctcatcctccctcctgctgctggcccccacccgcgcccccgaggcgcccccc
gcgcccggcgagccggcccccgacgcccgcctcttcgtcgcgcggcccggccgcgcctcc
cacggcgacttcccgctcaccccccacgccagcccggaccgccggcgggtggtgtcggcg
cccacgggcccctcggacccgagctccgccgccgacggcctccctcggccctggagccca
ccgcccaccggcagcctccggaggccgggcgcgcacgccccgcccgccgccgcgctgcgc
cgcacgcacacgatcaacagcggcgaggcccggccccgcggccgccacgcacggcccggc
acggacttggcccacctcctctcgtacgggggcccggacaggactgcgccccccgtgccc
tag
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