Phocoena sinus (vaquita): 116752313
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Entry
116752313 CDS
T07759
Symbol
SPOCK1
Name
(RefSeq) testican-1
KO
K08136
testican
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
psiu00535
]
116752313 (SPOCK1)
Proteoglycans [BR:
psiu00535
]
Extracellular matrix (ECM) proteoglycans
Others
116752313 (SPOCK1)
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GFIT
Motif
Pfam:
SPARC_Ca_bdg
Thyroglobulin_1
Kazal_2
Kazal_1
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
116752313
NCBI-ProteinID:
XP_032485069
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Position
3:57356047..57923226
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AA seq
439 aa
AA seq
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MPAIVVLAAAAAAWCFLQVESRHLDALAGGAGPNNGNFLDNDQWLSTVSQYDRDKYWNRF
RDDDYFRNWNPNKPFDQALDPSKDPCLKVKCSPHKLCVTQDYQTALCVSRKHLLPRQKKG
NVAHRHWAGPSNLVKCKPCPTAQSAMICGSDGHTYTSKCKLEFHACSTGKSLTTLCDGPC
PCLPEPKPPKHKAEKNACTDKELRNLASRLKDWFGALHEDANRVVKPTSSDTAQGRFDTS
ILPICKDSLGWMFNKLDMNYDLLLDHSEINAIYLDKYEPCIKPLFNSCDSFKDGKLSNNE
WCYCFQKPGGLPCQNEMNRIQKLNKGKSLLGALIPRCNEEGYYKATQCHGGTGQCWCVDK
YGNELAGSRKQGAVSCEEEQETSGDFGSGGSVVLLDDLEDEWELGPKDKVGKLRVHARAA
TEDDEDEGDEKEDEVGYIW
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgatcgtggtgctcgcggcggccgccgcggcgtggtgcttcctccaggtcgag
agccggcacctggacgcgctcgcaggaggcgcgggccccaacaacggcaatttcctggac
aatgaccagtggctgagcacagtctcccagtacgaccgggacaagtactggaaccgcttt
cgagacgatgattatttcagaaactggaatcccaacaagccttttgaccaagctctggac
ccatccaaagacccctgcctaaaggtgaaatgcagccctcacaagctgtgtgtgacccag
gactaccagactgccctgtgtgtcagccgtaagcacctgctccccaggcaaaagaagggg
aatgtagcccacagacactgggctggaccttcgaatctggtcaagtgcaagccctgtccc
acggcacagtcagccatgatctgcggctccgacggccacacctatacatccaagtgcaag
ttggagttccatgcttgttctactggcaaaagtctcaccaccctctgcgacgggccctgt
ccatgtctcccggagcccaagccaccaaaacacaaggcagagaagaatgcctgcacggac
aaggagttgaggaacctcgcttcccggctcaaagactggtttggagccctccacgaggat
gcaaacagggtcgtcaagcccaccagctccgacacagcccaaggcaggtttgacaccagc
atccttcccatctgcaaggactccctgggctggatgttcaacaagttggacatgaactat
gacctcctgcttgaccactcagagatcaacgccatctacctggataagtatgagccctgt
atcaagcctctcttcaattcctgtgactccttcaaggatggcaagctctctaacaatgag
tggtgctactgcttccagaagcctggaggtctcccttgccagaatgagatgaacaggatt
cagaagctgaacaaggggaaaagcctgttgggagcactcatacctcggtgtaatgaggag
ggctattacaaagccacacagtgccacggtggcacagggcagtgctggtgtgtggataaa
tacgggaacgagctagctggctccaggaaacagggtgctgtgagctgtgaagaggagcag
gaaacttcaggggattttggcagtggcggctctgtggtcctgctggatgacctagaggat
gaatgggagctgggaccaaaggacaaagtggggaagctgcgggtgcacgcccgagcagcg
acggaggacgatgaggacgagggcgacgagaaagaggacgaggtcgggtacatatggtag
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