Phocoena sinus (vaquita): 116752327
Help
Entry
116752327 CDS
T07759
Symbol
IRX2
Name
(RefSeq) iroquois-class homeodomain protein IRX-2
KO
K24889
iroquois-class homeodomain protein IRX
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116752327 (IRX2)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
116752327 (IRX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
116752327
NCBI-ProteinID:
XP_032485098
Ensembl:
ENSPSNG00000002053
UniProt:
A0A8C9AZL8
LinkDB
All DBs
Position
3:172332107..172337633
Genome browser
AA seq
474 aa
AA seq
DB search
MSYPQGYLYQAPGSLALYSCPAYGASALAAPRSEELARSASGSAFSPYPGSAAFTAQAAT
GFGSPLQYSADAAAAAAGFPSYMGAPYDAHTTGMTGAISYHPYGSAAYPYQLNDPAYRKN
ATRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTW
APRNKSEDEDEDEGDSARSKEESPDKVQEGTETSAEDEGISLHVDSLTDHSCSAESDGEK
LPCRAGDPLCESGSECKEKYDDLEDDEDDDEEEGERDLAPPKPVTSSPLTGVEAPLLSPP
SEAAPRGGGGGKTPLGSRTSPGAPPPASKPKLWSLAEIATSDLKQPSLGPACAPPGLPAA
AAPASSGAPPGGSPYPASPLLGRHLYYTSPFYGNYTNYGNLNAALQGQGLLRYNSAAAAP
GEALHAAPKAASDAGKAGAHPLEPHYRPPGGGYEPKKDASEGCTVVGGGLQPYL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacccgcagggctacctgtaccaggcgcccggctcgctggcgctatactcgtgc
ccggcgtacggcgcgtcggcactggcggcgccgcgcagcgaggagctggctcgctcggcg
tcgggctcggcgttcagcccttacccgggctccgcggccttcaccgcgcaggcggccacg
ggcttcggcagcccgctgcagtactcggccgacgctgccgctgccgccgccggcttccca
tcctacatgggtgcgccctacgacgcacacacgaccgggatgacgggcgccatcagctac
cacccttatggaagcgcggcctacccgtaccagctcaatgacccggcctaccgcaagaac
gccacgcgggatgccacggccacgctcaaggcctggctcaacgagcaccgcaagaacccc
taccccaccaagggcgagaagatcatgctggccatcatcaccaagatgaccctcacgcag
gtctccacctggttcgccaacgcgcgccggcgcctcaagaaggagaacaagatgacgtgg
gcccccaggaacaaaagcgaggatgaggacgaggacgagggcgactcggcaaggagcaag
gaggagagtccggacaaggtgcaggagggcaccgagacttcggcggaggacgaagggatc
agcctgcacgtcgactcgctcacggatcattcgtgctccgccgagtcggacggagagaag
ctgccgtgccgggccggggaccccctgtgcgagtcgggctcggagtgcaaggagaagtac
gacgacctggaggacgacgaggacgacgacgaggaggagggcgagcgggacctggcgccg
cccaagcccgtgacctcgtcgccgctcaccggcgtggaggcgccgctgctgagcccccca
tccgaggccgcgccccgcgggggcggcggcggcaagacgcccctgggtagccggacgtcg
ccgggcgcgccgccgcccgccagcaagcccaagctgtggtctctggccgagatcgccacg
tcggacctcaagcagccgagcctgggcccggcctgcgcgccgccggggctgccagcggcc
gccgcgcccgcttcgtcaggggcgccgccgggcggctcgccctaccccgcgtcgccgctg
ctcggccgccacctctactacacgtcgcccttctacggcaactacacaaactacgggaac
ttgaacgcggctctgcagggccagggtctcctgcggtacaactcggcggccgcggccccc
ggagaggcgctgcacgcggcgcccaaggctgccagcgacgcgggcaaggcgggcgcgcac
ccgctggagccccactaccggccccccggcggcggctacgagcccaagaaagatgccagt
gagggctgcaccgtggttggtggaggcctccagccctacctatag
DBGET
integrated database retrieval system
