Phocoena sinus (vaquita): 116752577
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Entry
116752577 CDS
T07759
Symbol
MED12L
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 12-like protein
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
116752577 (MED12L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psiu03021
]
116752577 (MED12L)
Transcription machinery [BR:
psiu03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
116752577 (MED12L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12-PQL
Med12
Peptidase_M17_N
Motif
Other DBs
NCBI-GeneID:
116752577
NCBI-ProteinID:
XP_032485236
Ensembl:
ENSPSNG00000015673
LinkDB
All DBs
Position
4:30908024..31234050
Genome browser
AA seq
2147 aa
AA seq
DB search
MAAFGLLSYEQRPLKRPRLGPPDVYPQDPKQKEDELTAVNVKQGFNNQPAFTGDEHGSAR
NIVINPSKIGAYFSSILAEKLKLNTFQDTGKKKPQVNAKDNYWLVTARSQSAIHSWFSDL
AGNKPLAILAKKELPLAKSGVPQVPILSKKEDVFAYLAKYSVPMVRATWLIKMTCAYYSA
ISEAKIKKRQATDPNLEWTQISTRYLREQLAKISDFYHLASSAGDGPVPVPPDVEQAMRQ
WEYNEKLAFHMFQEGMLEKHEYLTWILDVLEKIRPMDDDLLKLLLPLMLQYSDEFVQSAY
LSRRLAYFCARRLALLLSDGPNLLAAHSPHMMVGPNSSGIGAPSPGPPGPGMSPVQLAFS
DFLSCAQHGPLVYGLSCMLQTVTLCCPSALVWNYSTNDNKSANPGSPLDLLQVAPSSLPM
PGGNTAFNQQVRARIYEVEQQIKQRGRAVEVRWSFDKCQESTAGVTISRVLHTLEVLDRH
CFDRTDSSNSMETLYHKIFWANQNKDNQEAAPSDEAVVTLLCEWAVSCKRSGKHRAMAVA
KLLEKRQAEIEAERCGESEVLDEKESISSASLAGSSLPVFQNVLLRFLDTQAPSLSDPNS
ECEKVEFVNLVLLFCEFIRHDIFSHDAYMCTLISRGDLSISASTRPRSPAGENADEHYAK
DHDVKMEIFSPVPGESCENANPSLGRRMPVNGEKLLKREKPRELIFPSNYDLLRHLQYAT
HFPIPLDESSSHEYNQRTILLYGVGKEREEARHQLKKITKDILKILNKKSTTETGVGDEG
QKARKSKQEAFPTLETVFTKLQLLSYFDQHQVTSQISNNVLEQITSFASGTSYHLPLAHH
IQLIFDLMEPALNINGLIDFAIQLLNELSVVEAELLLKSSSLAGSYTTGLCVCIVAVLRR
YHSCLILNPDQTAQVFEGLCGVVKHVVNPSECSSPERCILAYLYDLYVSCSHLRSKFGDL
FSSACSKVKQTIYNNVIPANSNLRWDPDFMMDFIENPSARSINYSMLGKILSDNAANRYS
FVCNTLMNVCMGHQDAGRINDIANFSSELTACCTVLSSEWLGVLKALCCSSNHVWGFNDV
LCTVDVSDLSFHDSLATFIAILIARQCFSLEDVVQHVALPSLLAAACGDADAEPGARMTC
RLLLHLFRAPQACLLPQATGKPFPGIRSSCDRHLLAAAHNSIEVGAVFAVLKAIMMLGDA
KIGSNNVGSLKNDDFTVRGLRRDGSADDIWTASQNSKSCGKSISIETANLREYARYVLRT
ICQQEWVGEHCLKEPERLCTDKELILDPVLSNMQAQKLLQLICYPHGIKECTEGDNLQRQ
HIKRILQNLEQWTLRQSWLELQLMIKQCLKDPGSGSVAEMNNLLDNIAKATIEVFQQSAD
LNNNSSNSGMGLFNPNGIGSTDTSSTRQNGIKTFLSSSERRGVWLVAPLIARLPTSVQGR
VLKAAGEELEKGQHLGSSSKKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLTS
LQNQVNQILSNWREERYQDDIKARQMMHEALQLRLNLVGGMFDTVQRSTQWTTDWALLLL
QIITSGTVDMHTNNELFTTVLDMLGVLINGTLASDLSNASPGGSEENKRAYMNLVKKLKK
ELGDKRSESIDKVRQLLPLPKQTCDVITCEPMGSLIDTKGNKIAGFDSIDKKQGLQVSTK
QKVSPWDLFEGQKNPAPLSWAWFGTVRVDRKVIKYEEQHHLLLYHTHPMPKPRSYYLEPL
PLPPEEEEEGPTSPISQEPERKSAELSDQGKTTTDEEKKTKGRKRKTKSSSRVDEYPQSN
MYRVPPNYSPVSSQMMHHPQSTLWGYNLVGQPQQPGLFLQSQALTPGGSRLDPAGSFVPT
NTKQALSNMLQRRSGAVMQPPSLHAITSQQQLIQMKLLQQQQQQRLLRQAQTRPFQQGQP
GDQAALFAAQARPSPQLPQYPGLQQAQTMPQGYTMYGTQMPLQQTPQQQAGSVVLSPTYN
SRTYPAAHSNPALMERLRQMQQQPPSGYVQQQASPYLQPLSGSQRLNHQSLQQSPLVGGG
LDAVLTSVHPNLPSVSLSQDPVRPRQPQVRQQQRLLQMQQPQQSSQPQGQTLGLQTMQPQ
QPLFPRQGLQQTQQQQQTAALVRQLQKQLSSNQPQQGVTPYGHPSHF
NT seq
6444 nt
NT seq
+upstream
nt +downstream
nt
atggccgccttcgggcttctcagctatgagcagagaccgctgaaacgcccccggctcggg
ccgccggacgtctacccgcaggaccccaagcagaaggaggatgaacttaccgctgtgaat
gtaaagcaaggcttcaacaatcagcccgcctttactggagacgagcatggctcggctaga
aatattgtaattaacccgtcaaagattggagcttattttagcagcatattagctgagaaa
ctaaagcttaacactttccaggacaccggaaagaagaaaccacaagttaatgctaaagat
aattattggctggttactgctcgatcccagagtgcgattcatagttggttctctgactta
gcaggaaataaaccacttgctattttggcaaaaaaggagctgcctctggccaagtcaggt
gtccctcaggttcccatccttagtaaaaaagaagatgtttttgcatatttagctaagtat
tccgtgccaatggttcgagcaacgtggctgatcaagatgacttgtgcctattattctgct
atttctgaagcgaaaattaagaaacgtcaggctactgatcccaatttggagtggacacaa
atatctaccaggtatcttcgagagcagttggccaagatttccgacttttaccacctagct
tccagcgcaggcgatggccctgtccctgtgccacccgacgtggaacaagcaatgaggcag
tgggagtacaacgaaaagttggcattccacatgttccaggaaggaatgctagaaaaacac
gaatatttgacatggatcttggatgtgttagaaaagatcagaccaatggatgatgatctt
cttaaactcttattaccactaatgctgcagtattcagatgagtttgtccagtcggcctac
ctgtcccgccgccttgcctacttctgtgcccggcgtctcgcgttgctgcttagcgatggc
cccaacctccttgccgcccactcgccccacatgatggtaggaccaaacagctcgggcatc
ggggcccccagtcccggcccccccggccccggcatgagccccgtgcagctggccttctcc
gactttctctcctgtgcgcagcacggccccctggtttatggacttagttgtatgttgcag
actgttactctctgttgcccaagtgccttggtgtggaactactccacaaatgacaataag
agcgcgaacccgggctcacccctggatctgctgcaggtggccccctccagcctccccatg
ccgggcgggaacacggccttcaaccagcaggttcgggccaggatttatgaggtagaacag
cagatcaaacaaagaggccgtgcagtggaagttcggtggtcttttgacaagtgccaagag
tcaacagcaggggtgaccattagtcgggttttgcacacgttggaggtgttggatcgacac
tgctttgaccgaactgattccagcaattcaatggagacactttatcataagattttctgg
gcaaaccaaaacaaagataaccaagaggctgcccccagcgatgaagctgtggtgacgctg
ctgtgcgaatgggccgtgagctgtaagagatcaggcaagcacagggccatggctgtggca
aagctcttggagaagaggcaagcggagatcgaggcagagagatgtggtgaatcagaggtc
ttagatgagaaggagtccatttcttcagcctctcttgctggatctagtttgcctgttttc
cagaatgttctgctaaggtttttggatacacaggccccctcgttgtcggatccaaacagt
gaatgtgagaaggtggaatttgtgaatctggtgctgctcttctgtgagttcatccggcac
gacatcttctcccatgatgcctacatgtgcaccctcatctctcgaggagacctgtccatc
agcgcctccactcggccccggtcgccagcaggagagaatgcagacgagcactatgcaaag
gaccatgacgtgaagatggagattttttctcccgtgcctggagagtcctgtgagaatgct
aacccttccctgggcagaagaatgccagttaacggtgagaagctgttgaagagagaaaaa
ccaagggagttaatttttccgtctaattatgacctcctacgacatctgcagtatgcaacc
cattttcccatacctctggatgaatcttcaagtcatgagtataaccagcgcacaatcctt
ctttatggagtgggcaaagagcgtgaagaagcgaggcatcagttgaagaaaattaccaaa
gatattttgaaaatcctaaataagaagagcaccacagagaccggggttggagatgaagga
cagaaagccaggaagagcaaacaggaggcatttccaacactggagactgtgttcacaaaa
cttcaactcctttcatattttgaccaacatcaagtgacatctcagatctctaacaatgtg
ctggaacaaatcacaagctttgcatcaggaacatcgtaccatctcccactggctcaccat
attcagctcatctttgatctcatggagccagcgctgaatatcaatggcctcattgacttt
gcaatacagctcctgaatgaactgagtgttgtggaagccgaactgctcctgaaatcctcc
agcctggcaggaagttacacaacgggactgtgtgtctgcatcgtggccgttctcaggaga
taccacagttgtctgatcctgaatcccgatcagacggcccaggtgtttgaaggattgtgt
ggtgtggtaaagcatgtggtgaacccctcagaatgttcttccccagaaagatgcatctta
gcctacctctacgatctctatgtgtcatgtagccacctcagaagtaaattcggagacctc
ttcagtagtgcctgttcaaaagtaaagcaaaccatatataataatgtgattcctgcaaat
tctaacttgcgatgggatccagacttcatgatggattttattgagaatccctcagcccgt
agcatcaactactcaatgctgggcaagatccttagtgacaatgcggccaatcgctacagc
ttcgtctgcaacacactcatgaatgtatgtatgggccatcaggatgctggaaggattaat
gacatagccaatttctcctctgagctgacggcctgctgcaccgttctcagttcagaatgg
ctgggagtcctgaaggctctttgttgttcttcaaaccacgtctgggggtttaatgatgta
ctttgcactgtagatgtgagtgacctttcattccatgattcattagctactttcattgct
attctgatagcacgacagtgtttctccctggaggacgtcgtgcagcacgtcgctcttccc
tctctcctagccgcagcttgtggagatgcagacgcggagcctggggcgagaatgacatgc
cgactcctacttcatctcttccgagctccccaggcctgcctattacctcaggcaaccggc
aaacctttccccggaataagatcgtcctgtgatagacacctcttagccgctgctcacaac
agcattgaagtgggagcggtgtttgctgtcttaaaagcaattatgatgcttggagatgcc
aaaattggcagtaacaatgtcggctctttaaagaatgacgacttcaccgtgaggggttta
cgacgtgacggaagtgctgatgatatctggactgcctcacaaaattcaaaatcctgtggg
aaaagcatctccatagaaactgccaatttaagggaatatgccagatatgtactgaggact
atctgtcaacaggaatgggtaggagagcattgcttaaaagaacctgaaagattatgcaca
gacaaagaacttattttggaccctgtgctctcaaatatgcaagcacagaaattattgcaa
ctgatctgttatcctcatggcattaaagaatgtacagagggggacaacctacaaagacag
cacattaaacgcattcttcagaatcttgagcagtggaccctgaggcagtcctggctggaa
cttcagttaatgatcaaacagtgcttgaaggaccctggctctggttcggtggccgaaatg
aacaacctactggacaatattgccaaggcaacaatagaggtattccagcagtcggccgac
ctgaacaataactcttctaattcgggtatgggcctcttcaacccaaacgggattggaagt
accgatacgagtagcacaagacagaatggaataaagacatttctaagttcctctgaacgc
aggggcgtgtggctagtagcccccctaattgctaggctgccgacttctgtgcagggaaga
gtgttgaaagctgctggggaggagctggagaagggacagcacttgggttcttcttcaaaa
aaggaaagagacagacaaaaacagaaaagtatgtctcttttgagtcagcaaccattcctc
tccctggtccttacctgccttaagggacaagatgaacaacgagaaggcctcctaacatct
ctgcagaatcaagttaaccagattttaagtaattggagagaagaacggtaccaggatgac
ataaaagcacgacagatgatgcacgaggcattgcagctccgcctaaatttggtgggagga
atgtttgacacagtgcagagaagcacccagtggacgacagattgggcccttcttctcctt
cagatcattacttctggaaccgtcgacatgcacactaacaatgaattattcacaacagtg
cttgacatgctgggtgttttaatcaatggaacattggcctctgacctatcaaacgcatcc
ccagggggatctgaagagaacaaacgcgcatacatgaacttagtaaagaaactgaaaaaa
gagctgggagacaagcggtcagaaagtattgacaaagttcgacagttgctacctttgcca
aaacagacatgtgacgtcatcacttgtgaacctatgggctccttgattgacacaaaagga
aacaaaattgctggattcgactcaatagacaaaaaacagggtctccaggtctccacgaag
cagaaggtgtccccatgggatttgtttgagggtcagaagaacccagctcctctgtcctgg
gcctggtttgggactgtccgcgtggaccggaaggtcatcaagtacgaggaacagcatcac
ctcctcctgtatcacacacaccccatgcccaagccccgaagttactacctcgagccactg
cccctgccccctgaggaggaagaggaagggcctacatctcccatctctcaggaaccggag
aggaaatcagctgagctgtcagatcaaggaaaaaccacaacagatgaagagaagaagaca
aagggaaggaagcgcaagacgaaatccagctcgagagttgatgagtatccacagagcaac
atgtaccgagtgcctcccaactactcacccgtctcctcccagatgatgcatcacccacag
tccaccttgtggggctacaacctcgtgggtcagccccagcagcccggccttttccttcag
agccaggctctcactccaggtggctccaggttggaccccgcgggctcctttgtccccacc
aataccaagcaagctctgtccaacatgctgcagcggcgctcgggggccgtgatgcagccg
ccctcccttcacgccatcacgtcgcagcagcagttgatacagatgaagcttctgcagcag
cagcagcagcagcggctcctcaggcaagcccagacgcgacctttccaacagggccagccg
ggggaccaggctgctctctttgctgctcaagcacggccctcccctcagctcccccagtat
ccaggtctgcagcaagcacagaccatgccccagggctatacgatgtacggaacgcagatg
cctttgcagcagacccctcagcagcaggctggcagcgtggtcctgtctcctacctataat
tccagaacctatccggctgcgcattccaacccggcgctaatggaaagactcagacagatg
cagcagcagccgccgagtggctacgttcagcagcaggcgtcgccgtacctgcagcccctg
agtggctctcagagactgaatcatcagtcgcttcagcagagccctctggtgggtggagga
ctggatgcggtgctgacttccgtgcatccaaaccttccctcggtgtccctgtctcaggac
ccagtgaggcccagacagccacaggtgcgacagcagcagaggctcctccagatgcagcag
ccccagcagtcctcgcagccccagggtcagaccctcggtctccaaaccatgcagcctcag
cagcctctgtttcccaggcaaggcttgcagcagacccagcaacagcagcagacagccgct
ctggtgcggcagctccagaagcagctttccagtaaccagccacagcaaggagtgacgccc
tacgggcatccttcacacttctga
DBGET
integrated database retrieval system
