Phocoena sinus (vaquita): 116752694
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Entry
116752694 CDS
T07759
Symbol
USP25
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 25
KO
K11849
ubiquitin carboxyl-terminal hydrolase 25 [EC:
3.4.19.12
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04657
IL-17 signaling pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
116752694 (USP25)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psiu01002
]
116752694 (USP25)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116752694 (USP25)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116752694 (USP25)
Peptidases and inhibitors [BR:
psiu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116752694 (USP25)
Ubiquitin system [BR:
psiu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116752694 (USP25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP_UIM_N
UBA_8
UIM
UIM_2
UBA_4
Motif
Other DBs
NCBI-GeneID:
116752694
NCBI-ProteinID:
XP_032485331
Ensembl:
ENSPSNG00000012355
LinkDB
All DBs
Position
4:117459163..117607483
Genome browser
AA seq
1130 aa
AA seq
DB search
MTVEQNVLQQSAAQKHQQTFLNQLREITGINDAQILQQALKDSNGNLELAVAFLTAKNAK
TPQQEETTYYQTALPGNDRYISVGSQADTNVIDLTGDDKDDLQRAIALSLAESNRAFRET
GITDEEQAISRVLEASIAENKACLKRTPTEVWRDSRNPYDRKRQDKAPVGLKNVGNTCWF
SAVIQSLFNLLEFRRLVLNYKPPSNVQDLPRNQKEHRNLPFMRELRYLFALLVGTKRKYV
DPSRAVEILKDAFKSNDSQQQDVSEFTHKLLDWLEDAFQMKAEEETDEEKPKNPMVELFY
GRFLAVGVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSENSGKSGQE
HWFTELPPVLTFELSRFEFNQALGRPEKIHNKLEFPQVLYLDRYMHRNREITRIKREEIK
RLKDYLTVLQQRLERYLSYGSGPKRFPLVDVLQYALEFASSKPVCTSPVDDIDASSPSSG
SVPSQTLPSTTDQQGAPSSELPSTSPASIVAISSRSVIHKPFTQSRIPPDLPMHPAPRHI
TEEELSVLESCLHRWRTEIENDTRDLQESISRIHRTIELMYSDKSMIQVPYRLHAVLVHE
GQANAGHYWAYIFDHRENRWMKYNDIAVTKSSWEELVRDSFGGYRNASAYCLMYISDKPQ
FLIQEEFNKETGQALVGIETLPPDLRDFVEEDNQRFEKELEEWDAQLAQKALQEKLLASQ
KLRESESSVTTAQAGEPEYLEQPSRSDFSKHLKEETIRIITKASHEHEDKSPETVLQSKP
ENTTSQPPSNQQVVEVAIPHVGKFMIESKEGGYDDEIMMTPNMQGIIMAIGKSRNVYDRC
GPEAGFFKQIKVEYSRLVXLAQEDTPPETGLSINHVVVYFIQNQAPKKIIEKTLLEQLWR
XKFEFDERCHNLXEVAQAKIEMINLKKXNLEEYEVMCLLRGMHQDYRKFRETTMYLIIGL
ENFQRESYIDSLLFLICAYQNNKELLSKGPYRGHDEELISHYRRECLLVSXIKAAELFES
GEDREXNNGLIIMNXFIVPFLPLLLVDEMEEKDILAVEDMRNRWCSYLGQEMESNLQEKL
TDFLPKLLDCSTEIKGFHEPPKLPPYSTHELCERFARIMLSLSRTPADGR
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtggagcagaacgtgctgcagcagagcgcggcgcagaagcaccagcagacgttt
ttgaaccagctgagagaaattactgggattaatgatgcccagatactacagcaagccttg
aaggatagtaacggaaacttggaactagcagtggctttccttactgcgaagaatgctaag
acccctcagcaggaggagacaacttactaccaaacagcgttacctggcaatgatagatac
atcagtgtgggaagccaagcagatacgaatgtgattgatctcactggagatgataaagat
gatcttcagagagcaattgccttgagtttggcggaatcaaacagggcattcagggagact
ggaataactgatgaggagcaagccattagcagagttcttgaagccagcatagcagaaaat
aaagcatgtttgaagaggacacctactgaagtttggagagattctcgaaacccttacgat
agaaaaaggcaggacaaagctcctgttgggctaaagaatgttggcaatacttgctggttt
agtgctgttattcagtcattattcaatcttttggaatttagaagactagttctgaattac
aagcctccatcaaatgttcaagatttaccccgaaaccaaaaggagcatcggaatttgcct
tttatgcgtgagcttcggtatctgtttgcacttcttgttggtactaaaaggaaatatgtt
gatccatcaagagcagttgaaattcttaaggatgctttcaaatcaaatgactcccagcag
caagacgtgagtgagtttacacacaaattattagattggttagaagatgccttccaaatg
aaagctgaagaggagacggatgaagagaagccaaagaaccccatggtagagttgttctat
ggaagattcctagccgtgggagtgcttgaaggtaaaaaatttgaaaatactgaaatgttt
ggtcagtacccacttcaggtcaatggattcaaagatctacatgagtgcctagaagctgcc
atgattgaaggagaaattgagtctttacattcggaaaattcaggaaagtccggccaagag
cattggtttactgaactaccacctgtgttaacgtttgaattgtcaagatttgaatttaat
caggcattgggaagaccagaaaaaattcacaacaaattggaatttcctcaagttttatat
ctggacagatacatgcatagaaacagagaaataacaagaattaagagggaagagatcaag
agactaaaagattacctcacagtattacaacagagacttgaaaggtatttaagctatggt
tcgggtcccaaacgattccccttggtagatgttctgcagtatgcgttggaatttgcctca
agtaaacctgtttgcacttctcctgttgatgatattgatgctagttccccatctagtggt
tctgtaccatcacagacattaccaagcacaacagaccagcagggagctccttcttcagaa
ctgccaagcacatcacccgcatcaatagttgccatttcgtcgagatcagtaatacacaaa
ccattcactcagtctcggatacctccagatttgcccatgcatccagcaccaaggcacata
acagaagaggaactctctgtgctagaaagctgtttacatcgctggaggacagaaatagaa
aatgacaccagagatttgcaggaaagcatatctagaatccatcgcacaattgaactaatg
tactctgacaaatctatgatacaagttccttatcgcttacatgctgttttagttcatgaa
ggccaagctaatgccgggcactactgggcatacatttttgatcatcgtgaaaacaggtgg
atgaagtacaatgatattgctgtaacaaaatcatcatgggaagagctagtgagggactct
tttggtggttatagaaatgccagtgcatactgtttaatgtacataagtgataagccacaa
ttcttaatacaagaggaatttaataaagaaactgggcaggcccttgttggaatagaaaca
ctaccaccagacttaagagattttgttgaggaagacaaccagcgatttgagaaagagcta
gaagaatgggatgcacaacttgcccagaaagctttgcaggaaaaacttttagcatctcag
aaattgagagagtcagagtcttctgtgacaacagcacaagcaggagaaccagaatatcta
gagcagccatcaagaagtgatttctcaaagcacttgaaagaagaaactattcgaataatt
accaaggcatcacatgagcatgaagataaaagtcctgaaacagttttacagtcgaaacct
gaaaataccacaagccaaccaccttctaaccagcaagttgtagaggtggcgattcctcat
gtagggaaatttatgattgagtcaaaggaggggggttatgatgacgagatcatgatgaca
ccgaacatgcaaggtattatcatggcgataggtaaatccaggaatgtatatgacaggtgt
ggccctgaagcagggttctttaagcaaataaaggtggaatattcaaggttggttnaattg
gcccaagaagataccccaccagaaacaggactatcgattaatcatgtagtagtctacttt
atccagaatcaggctccaaagaaaatcattgagaaaacattgctagaacaattatggaga
tagaaatttgagtttgatgaaaggtgtcataacctanntgaagttgctcaagccaaaatt
gaaatgataaacctgaagaagnntaacttggaggagtatgaggtaatgtgccttttgaga
ggaatgcatcaggattatagaaaattcagggaaacaaccatgtatctcataattgggcta
gaaaattttcagagagaaagttatatagattccttgctgttccttatctgtgcttatcag
aataacaaagaactcttgtccaaaggcccatacagaggacatgatgaagaattgatatca
cattatagaagagaatgtttactagtaagttgaatcaaggctgcagaactgtttgaatct
ggagaggatcgagaangtaacaatggtctgattatcatgaatnggtttattgtcccattt
ttgcccttgttattggtggatgaaatggaagagaaagatatacttgctgtggaagatatg
agaaatcgatggtgttcctatcttggacaagaaatggaatcaaacctccaagagaagctg
acagattttctgccaaaactgcttgattgttctacggagattaaaggtttccatgagccg
ccgaagttacctccgtactccacgcatgaactctgtgagcgatttgcccgaatcatgttg
tccctcagtcggactcctgctgatggaagataa
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