Phocoena sinus (vaquita): 116752764
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Entry
116752764 CDS
T07759
Symbol
TOP2B
Name
(RefSeq) DNA topoisomerase 2-beta isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu01524
Platinum drug resistance
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09160 Human Diseases
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
116752764 (TOP2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psiu03032
]
116752764 (TOP2B)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116752764 (TOP2B)
Enzymes [BR:
psiu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
116752764 (TOP2B)
DNA replication proteins [BR:
psiu03032
]
Eukaryotic type
DNA Topoisomerases
116752764 (TOP2B)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
116752764 (TOP2B)
Centrosome formation proteins
Centriole proteins
116752764 (TOP2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
Toprim
HATPase_c
DUF7180
Microp_apicomplexa_20
Motif
Other DBs
NCBI-GeneID:
116752764
NCBI-ProteinID:
XP_032485472
Ensembl:
ENSPSNG00000003991
LinkDB
All DBs
Position
4:1056629..1125602
Genome browser
AA seq
1622 aa
AA seq
DB search
MAKAGGGGGGSGAGAGGLGALTWVTLFDQNNAAKKEESETANKNDSSKKLSVERVYQKKT
QLEHILLRPDTYIGSVEPLTQLMWVYDEDVGMNCREVTFVPGLYKIFDEILVNAADNKQR
DKNMTCIKVSIDPESNIISIWNNGKGIPVVEHKVEKVYVPALIFGQLLTSSNYDDDEKKV
TGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMMKTSEAKIKHFDGEDYTCIT
FQPDLSKFKMEKLDKDIVALMTRRAYDLAGSCKGVKVMFNGKKLPVNGFRSYVDLYVKDK
LDETGVALKVIHELANERWDVCLTLSEKGFQQISFVNSIATTKGGRHVDYVVDQVVGKLI
EVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPSFDSQTKENMTLQPKSFGSKCQLSEKF
FKAASNCGIVESILNWVKFKAQTQLNKKCSSVKYSKIKGIPKLDDANDAGGRHSLECTLI
LTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQY
KKSYDDAESLKTLRYGKIMIMTDQDQDGSHIKGLLINFIHHNWPSLLKHGFLEEFITPIV
KASKNKQELSFYSIPEFDEWKKHIENQKAWKIKYYKGLGTSTAKEAKEYFADMERHRILF
RYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQFLYGTATKHLTYNDF
INKELILFSNSDNERSIPSLVDGFKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSAYH
HGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSSLARLLF
PAVDDNLLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRR
MLEGLDPHPMLPNYKNFKGTIQELGQNQYAVSGEIFVVDRNTVEITELPVRTWTQVYKEQ
VLEPMLNGTDKTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCN
SMVLFDHMGCLKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEK
IQGKITIENRSKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEETQNQHDDSSSDSGTPS
GPDFNYILNMSLWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAFVEELDKV
EVQEREDVLAGMAGKAIKGKVGKPKVKKLQLEETMPSPFGRRIVPEITAMKADASKKLLK
KKKGDLDTTAVKVEFDEEFSGAQVEGAGEEALIPSAPINKGPKPKREKKEPGTRVRKAPT
SSGKPSAKKVKKRNPWSDDESKSESDLEETEPVVIPRDSLLRRAAAERPKYTFDFSEEED
DDADDDDDNNDLEELKVKASPITNDGEDEFVPSDGLDKDEYTFSPGKSKASPEKSSHDKG
QDYGNLFSFPSYSQKSEDDSAKFDSNEEDSASVFSPSFGLKQTEKVPSKTVAAKKGKPSL
DTAPKPKRIPKQKKVETVNSDSDSEFGVPKKTTAPKGKGRGAKKRKASGSENEGDYNPGR
KSSRTSKKPKKTSFDQDSDMDIFPSDFTSEPPSVPRTGRARKEVKYFAESDEEEDVDFAM
FN
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggcgggcggcggcggcggcggcagcggcgcgggagctggcggcctcggggcg
ctgacctgggtgactctttttgatcagaacaatgctgcaaaaaaagaagagtcagaaact
gcaaacaaaaatgattcttcaaagaagttgtctgtcgagagagtgtatcagaaaaagaca
caacttgaacatattctccttcgtcctgatacgtacattgggtcggtggagccattgaca
cagctcatgtgggtgtatgatgaagatgtaggaatgaattgcagagaggttacctttgtg
ccgggtttatacaagatctttgatgaaattttggttaatgcagctgacaataaacagagg
gataagaacatgacctgtattaaagtttctattgatcctgaatctaacattataagcatc
tggaataatgggaaaggcattccggtagtagaacacaaagtagagaaagtttatgttcct
gcattaatttttggacagcttttaacatccagtaactatgacgatgatgagaaaaaagta
acaggtggtcgcaatggttatggtgcaaaactttgtaatattttcagtacaaagttcaca
gtagaaactgcttgcaaagaatacaaacatagttttaagcagacatggatgaataatatg
atgaagacttctgaagccaaaattaaacattttgatggtgaagattacacatgcataaca
ttccaaccagatctgtccaagtttaagatggagaaacttgacaaggacattgtagctctc
atgaccagaagagcttacgatttggctggttcgtgcaaaggagtcaaggttatgtttaat
ggaaagaaattgcctgtaaatggatttcgcagttatgtagatctttatgtgaaagacaag
ttggatgaaactggagtggccctaaaagttattcatgaacttgcaaatgaaagatgggat
gtttgtctcacactgagtgaaaaaggattccagcaaatcagctttgtaaatagcattgca
acaacaaaaggtggacggcatgtggattatgtagtagaccaagttgttggtaaactgatt
gaagtagttaagaaaaagaacaaagctggtgtgtcagtgaaaccatttcaagtaaaaaac
catatatgggtttttattaactgccttatcgaaaatccaagttttgattctcagactaag
gaaaacatgactttgcagcccaaaagttttggatccaaatgccaactgtcagaaaagttt
tttaaagcagcctctaactgtggcattgtggaaagtatcctgaactgggtgaaatttaag
gctcagacgcagctgaacaagaagtgttcatcagtaaagtacagtaaaatcaaaggtatt
cccaaactggacgatgctaatgatgctggtggcaggcactccctggagtgcacgctgata
ctgacggaaggggactctgctaagtcgctggccgtgtccggactgggcgtgattgggagg
gacaggtacggggtcttccccctcaggggcaagatcctcaacgtgcgggaggcctctcac
aagcagatcatggagaatgcagaaataaacaatatcattaagatagttggtctacaatac
aagaaaagttatgatgatgcagaatcgctgaaaaccttacgctatgggaagattatgatt
atgactgatcaggatcaagatggttctcacataaaaggcctgcttattaatttcatccat
cacaattggccatcacttttgaagcatggttttcttgaagagttcattactcctatcgta
aaggctagcaaaaataagcaggaactttccttctatagtattcctgaatttgatgagtgg
aaaaaacatatagaaaaccagaaagcctggaaaataaaatactacaaagggttgggtacc
agtacagctaaggaagccaaggaatattttgctgatatggaaaggcaccgcatcttattt
agatatgctggtcctgaagatgatgctgccattaccttggcattcagtaagaagaagatc
gatgacagaaaagaatggttaacaaattttatggaagatcggagacagcgtaggttacat
ggcttaccagagcaatttttatatggtacagcaacaaagcatttgacttacaatgatttc
atcaacaaggaattgattctcttctcaaactcagacaatgaaaggtctataccatctctt
gttgatggctttaaaccaggccaacgaaaagttttatttacctgtttcaagaggaatgat
aaacgcgaagtaaaagttgcacagttggctggatctgttgccgagatgtctgcttatcat
catggagaacaagcactgatgatgactatcgtgaacttggctcagaactttgtggggagt
aacaacattaacttgcttcagcccatcggtcagtttggaactcggcttcacgggggcaaa
gatgctgcaagtcctcgttacattttcacgatgttaagctctttggcaagactgcttttc
cctgctgtggacgacaacctgcttaaattcctttatgatgataatcaacgcgtagagcct
gagtggtatattcccataatccccatggttttaataaatggtgctgagggcatcggcaca
ggatgggcttgtaaactacccaactatgatgctagggagattgtgaacaacgtcagacgg
atgctggaaggcttggatcctcatcccatgcttccaaactacaaaaactttaaaggaaca
atccaagaacttggtcaaaaccaatatgcagtcagtggtgaaatatttgtggtggataga
aacacagtggagattacagagcttcccgttagaacttggacacaggtatacaaagaacag
gttttagaacctatgctaaatggaacagataaaacaccagcattaatttctgattataaa
gaataccatactgatacaactgtgaaatttgtggtgaaaatgactgaagagaaactagca
caagcagaagctgctggattgcacaaagtttttaaacttcaaactactcttacttgtaat
tccatggtactctttgatcatatgggatgtctgaagaagtatgaaactgtgcaagacatt
ttgaaagaattctttgatttacgattaagctattatggtttacgtaaggagtggcttgta
ggaatgctgggagcagaatctacaaagcttaacaatcaagcccgtttcattttagagaag
atacaagggaagattactatagagaataggtcaaagaaagatttgattcaaatgttagtc
cagagaggttatgaatctgacccagtgaaagcctggaaagaagcacaagaaaaggcagca
gaagaggaagaaacacaaaaccagcatgatgatagttcctctgattcaggaactccttca
ggccctgattttaattatattttaaatatgtctctatggtctcttactaaagaaaaagtt
gaagaactgattaaacagagagatgcaaaagggcgagaggtcaatgatcttaaaagaaaa
tctccttcagatctttggaaagaagatttagcagcttttgttgaagaactggataaagtg
gaagtgcaagaacgagaagatgttctggctgggatggctggaaaagcaataaaagggaaa
gttggcaaacctaaggtgaagaagcttcaactggaagagacaatgccctcacctttcggg
agaagaatagttcctgaaattactgccatgaaggcagatgccagtaagaagttgctgaag
aagaagaagggtgatctcgataccacagcagtgaaagtggaatttgatgaagaattcagt
ggtgcacaagtagaaggtgcaggagaagaggcattgatcccgtcagctcctataaataaa
ggtcccaaacccaaaagggagaaaaaggagcctggtaccagggtgagaaaagcacctaca
tcatctggtaaacccagcgcaaagaaagtgaagaaacggaatccttggtcagacgatgaa
tccaagtcagaaagtgacttggaagaaacagaacctgtggttattccacgagattcttta
cttaggagagcggctgctgaaaggcctaagtacacatttgatttctcagaagaggaggac
gacgatgccgatgatgacgatgacaataatgatttagaggaattgaaagttaaagcatct
cccataacaaatgatggagaagatgaatttgtcccttcagatggcctagataaagatgaa
tatacgttttcaccaggcaaatccaaagctagtccagaaaagtcttcccatgacaaaggt
caggattacgggaatctcttctcatttccttcatactctcagaagtcagaagatgattca
gctaaatttgacagtaatgaagaagattctgcttctgtcttttcaccatcatttggtctg
aaacaaacagaaaaagttccaagtaaaacagtagctgctaagaagggaaaaccatcttta
gatacagcccccaagcccaagagaattcccaaacagaagaaagtagagactgtaaactct
gactcggattccgaatttggcgttccaaagaagacaacagcacccaaaggtaaaggccga
ggggcaaagaagaggaaagcatctggctctgaaaacgaaggtgattataaccctggcagg
aaatcctctaggacaagcaagaaaccgaagaaaacatctttcgatcaggattcagatatg
gacatcttcccatcagacttcacttctgaaccaccttctgtgccgcggaccggtcgggct
aggaaagaagtaaaatattttgcagagtctgatgaagaagaagatgttgattttgcgatg
ttcaattag
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integrated database retrieval system
