Phocoena sinus (vaquita): 116752765
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Entry
116752765 CDS
T07759
Symbol
RARB
Name
(RefSeq) retinoic acid receptor beta isoform X1
KO
K08528
retinoic acid receptor beta
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu05200
Pathways in cancer
psiu05222
Small cell lung cancer
psiu05223
Non-small cell lung cancer
psiu05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116752765 (RARB)
09162 Cancer: specific types
05226 Gastric cancer
116752765 (RARB)
05222 Small cell lung cancer
116752765 (RARB)
05223 Non-small cell lung cancer
116752765 (RARB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116752765 (RARB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
psiu03310
]
116752765 (RARB)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116752765 (RARB)
Nuclear receptors [BR:
psiu03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
116752765 (RARB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
116752765
NCBI-ProteinID:
XP_032485476
Ensembl:
ENSPSNG00000004020
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All DBs
Position
4:complement(1125044..1570462)
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AA seq
455 aa
AA seq
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MTTSSHACHVPAVNGHMTHYPAAPYPLLFPPVIGGLSLPPPHGLHSHPPPSGCSTPSPAT
IETQSTSSEELVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNM
IYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKEPSKQECTESYEM
TAELDDLTEKIRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIV
EFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNA
GFGPLTDLVFTFAGQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALK
IYIRKRRPSKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGH
EPLTPSSSGNTAEHSPSTSPSSVENSGVGQSPLLQ
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccagtagccacgcatgtcacgtcccagcagtgaacgggcacatgactcactat
cccgccgcaccctacccactactcttcccaccggtcattggcggactctccctgcctccc
ccgcatggcctccacagccatcctccgccgagtggatgtagcaccccatcacctgcaacg
attgaaacacagagcaccagctccgaggaactggtcccgagccctccgtctccacttcct
ccccctcgggtgtacaagccttgcttcgtctgccaggacaagtcatcggggtaccactac
ggggtcagcgcctgcgaggggtgtaaggggtttttccgcagaagtattcagaagaacatg
atttacacttgtcaccgagataagaactgtgttattaataaagtcaccaggaatcgatgc
cagtactgtcgactccagaagtgctttgaagtgggaatgtccaaagaatcggtcaggaat
gacagaaacaagaaaaagaaggagccttcgaagcaggaatgcacggagagctacgaaatg
acggccgagctggacgatctcacggagaagatccggaaagcccaccaggaaaccttcccc
tcgctctgccagctgggcaagtacaccacgaattccagtgccgaccatcgagttcgactg
gatctgggcctctgggacaaattcagtgaactggctaccaagtgcattattaagatcgtg
gagtttgctaaacgtctgccaggcttcactggcttgaccatcgcagaccaaatcaccctg
ttgaaggcggcctgtttggacatcctgattctgagaatctgcaccaggtataccccagag
caagacaccatgacgttttcggacggcctgaccctgaatcgaacccagatgcacaacgcc
gggttcggccccctgaccgacctcgtgttcaccttcgccggccagcttctgcctctggag
atggacgacacggagacaggccttctcagcgccatctgcttgatctgtggagaccgtcag
gaccttgaggaaccaacaaaagtagataagctacaagaaccactgctggaagcactaaaa
atttatatcagaaagagacgacccagcaagcctcacatgtttccaaagatcctcatgaaa
atcacagatctccgcagcatcagtgctaaaggtgcagaacgtgtaattaccttgaaaatg
gaaattcctggctccatgccccctctcattcaggaaatgctggagaattctgaaggacat
gaacccttgaccccaagctcgagtgggaacacagcagagcacagtcccagcacctcgccc
agttccgtggagaacagcggtgtcggtcagtcaccactgctgcaataa
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