Phocoena sinus (vaquita): 116752769 Help Entry 116752769         CDS       T07759                                  Symbol NPHP3 Name (RefSeq) nephrocystin-3 isoform X1   KO K19360   nephrocystin-3 Organism psiu  Phocoena sinus (vaquita) Brite KEGG Orthology (KO) [BR:psiu00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:psiu03037]     116752769 (NPHP3) Cilium and associated proteins [BR:psiu03037]  Primary cilia and associated proteins   Nephronophthisis-related proteins    116752769 (NPHP3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TPR_NPHP3 TPR_12 NPHP3_hel NPHP3 TPR_10 TPR_1 TPR_8 TPR_7 TPR_2 TPR_MalT TPR_16 TPR_19 TPR_17 NPHP3_N TPR_3 TPR_11 AAA_16 NACHT KAP_NTPase AAA_22 DUF2225 AAA_19 AAA_14 T2SSE Viral_helicase1 FliD_C ARM_TT21_4th TPR-S Motif Other DBs NCBI-GeneID:  116752769 NCBI-ProteinID:  XP_032485486 Ensembl:  ENSPSNG00000009356 LinkDB All DBs Position 4:complement(13767803..13819361) Genome browser AA seq 1345 aa AA seqDB search MGTASSLVSPAGGEVIEDTYGAGGGEACEIPVEVKPKARLLRSSFRRGAGAVAGAGPGSL PRGAGGGGLLGASFKSTGSSVPELEYAAAEYERLKKEYEIFRVSKNQELLSMGRREAKLD TENKRLRAELQALQKTYQKILREKESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKE NEIQDLLRAKRELESKLQRLQVQGIHVFDPGESDSDDNCTDVTAAGPQCEYWTGGALGSE PSIGSMIQLQQSFRGPEFALSSIDIEGPFANVNRDDWDIAVASLLQVTPLFSHSLWSNTV RCYLIYTDETQPEMDLFLKDYSPKLKRMCETMGYFFHAVYFPIDIENQYLTVRKWEIEKS SLVILFIHLTLPSLLLEDCEEAFLRNPEGKPRLIYHRLEDGKVSSDSVQHLIDQVSNLNK TNKAKIIDHSGDPAEGVYKTYIYVEKIIKQDILGFETTDLETKDLGSEDSIPEEDDFGDV LWDMHDEQEQMEAFQQASNSAHELGFEKYYQRLNDLVAAPAPIPPLLVSGGPGSGKSLLL SKWIQLQQKNSPNTLILSHFVGRPMSTSSESSLIIKRLTLKLMQHSWSVSALTLDPAKLL EEFPHWLEKLSARHQGSIIIIIDSIDQIQQVEKHMKWLIDPLPVNVRVIVSVNVETCPPA WRLWPTLHLDPLNPKDAKSIIIAECHSVDIKLSKEQEKKLERHCRSATTCNALYVTLFGK MIACAGRAGNLDKILLQCFQCQDTVSLYRLVLRSIQESMTNDMDKELMKQILCLVNVSHN GVSESELMEFYPELSWAVLTSLIHSLHKMCLLTYGCGLLKFQHLQAWETVRLEYMEGPTI ISSYRQKLTNYFTMQLSQDRVTWRSADELPWLFQQQGSKQKLHDCLLNLFVSQNLYKRGH FAELLSYWQFVGKDKSAMAAEYFDSLKQYEKNCEGEESMICLADLYETLGRFLKDLGLLS QAVVPLQRSLEIRETALDPDHPQVAQSLHQLASVYVQWKKFGNAEQLYKQALEISENAYG ADHPHIARELEALATLYQKQNKYEQAEHFRKKSFKIRQKATRRKGNLYGFALLRRRALQL EELTLGKDTPDNARTLNELGVLYYLQNNLETADQFLKRSLEMRERVLGPDHPDCAQSLNN LAALCNEKKQYDKAEELYERALDIRRRALAPDHPSLAYTVKHLAVLYKKMGKLDKAVPLY ELAVEIRQKSFGPKHPSVATALVNLAVLYSQMKKHIEALPLYERALKIYEDSLGRMHPRV GETLKNLAVLSYEEGDFEKAAELYRRAMEIKEAETSLLGGKAPSRHSSSGDTVSLKTTHS PNVFLHQGQSSSLAQFSTSKKSFKE NT seq 4038 nt NT seq  +upstreamnt  +downstreamnt atggggactgcctcgtcgctcgtgagccccgctggcggggaggtgatcgaggacacgtac ggggcgggcggcggcgaggcttgcgagatcccggtggaggtgaagcccaaggcccgcctg ctacgcagctcgttccgccggggcgcgggggcggtggcgggggccgggccgggttcgctg ccccgcggggcgggcggcggcgggctgctgggggccagcttcaagtccactggctcgtcc gtgcccgagctggagtacgcggcggccgagtacgagcggctgaaaaaggagtacgagatc ttccgggtcagcaagaaccaggagttgttatccatgggccgccgcgaggccaagctggac acggagaacaagcggctgcgggcagagctgcaggcacttcagaaaacttaccagaagata cttcgggaaaaggaaagtgctttagaagcaaaatatcaagcaatggagagagcagctaca tttgaacatgacagagataaagttaagaggcaatttaagatttttagggagaccaaggaa aatgaaattcaggatttactgagggccaagcgagagttggagagtaaacttcagaggcta caggttcaggggatccatgtatttgatcctggagagtctgattcagatgacaactgtaca gatgttactgctgctggaccccagtgcgagtattggactggtggagccttgggaagtgag ccctccatagggagtatgattcagcttcagcagtctttccggggccctgagtttgccctt agttctatagatatagaaggaccctttgctaacgtcaacagagatgactgggatattgct gtagctagtttattacaagttacccccttgttttcacattctctgtggagcaacactgtc agatgttacctcatttatacagatgaaacccagcccgaaatggatcttttccttaaggac tattcacctaaacttaaaagaatgtgtgagacaatgggatattttttccatgctgtgtat tttccaattgatattgaaaatcagtacctcactgtaagaaaatgggaaattgagaagagt tcattagttatcttattcattcatttaactttaccaagcctgttattggaagactgtgaa gaagcttttctgagaaaccctgaaggcaaaccacgattaatttatcatcgtttggaagat gggaaagtcagttctgactctgtccagcacctgattgatcaagtttctaacctgaacaag accaacaaagccaagatcattgatcactcaggagatcctgcagaaggagtctataaaacc tatatttatgtagaaaagattattaaacaggacatcctgggctttgaaactacagacctg gaaactaaggatttgggcagtgaagactctattccagaagaagatgattttggtgatgtt ctgtgggacatgcatgatgaacaagagcaaatggaagcttttcagcaggcttcaaattca gcccatgagttgggatttgagaaatattaccagcgccttaatgatctagtggcagcacca gcaccaattccaccccttcttgtatctggaggaccaggctctggaaagtcccttctttta tcaaagtggatccagttacaacagaagaattcccctaacacactaattctttctcatttt gtggggaggcccatgtcaaccagctcagagtcttccttgattattaaacgactgactcta aagttgatgcagcattcttggtcagtatctgctctgacattggatcctgctaagcttctg gaagaatttccacattggctggaaaaactctctgcccgtcatcaaggcagcatcatcatc attattgattctatagatcaaattcagcaagttgaaaaacacatgaaatggctgatagat ccactgccagtgaatgtaagagtaattgtttctgtgaatgtggaaacatgccctccagca tggaggttgtggcctacacttcatcttgaccctttaaatcctaaagatgcaaaatctatt ataatcgcagaatgccactctgtagacattaaactgagtaaagagcaggagaagaagcta gaacgacactgtcgttctgctacaacctgcaatgccctttatgtcactcttttcggcaaa atgattgcgtgtgctgggagagcaggcaatttagataaaatccttcttcagtgtttccag tgtcaagatactgtttcattatatagacttgttcttcgatctatccaggagtccatgaca aatgatatggataaagagctaatgaaacagattctctgccttgtaaatgttagtcacaat ggtgtgagtgaatcagaattgatggaattctatcctgagttatcctgggctgtcttgacc tcccttattcacagtttacacaaaatgtgtttgttgacttatggttgtggtttgctcaag tttcaacatctacaggcttgggaaacagtgagactagagtacatggaaggtcccaccatt atttcttcatataggcaaaagctaaccaactatttcaccatgcagctaagtcaggaccga gtgacttggaggagtgcagatgaactgccttggctattccagcagcagggaagtaaacag aagctgcacgattgccttcttaacctctttgtgtctcaaaacctctataaaagaggacac tttgctgagttgctgagttactggcagtttgttggcaaagacaaaagcgcgatggcagca gaatactttgattcattgaagcagtatgagaaaaactgtgaaggcgaggagagcatgatt tgcttagctgacctttatgaaaccctggggcgatttctcaaggatctaggccttctcagt caggctgtggtgcctttgcagaggtctctagaaattcgagaaacagctttagatccagat cacccacaagtagctcagtccctccaccaactagcgagtgtgtacgtgcagtggaagaaa tttggcaatgctgaacaactatataaacaggcattggaaatctcagaaaatgcctatggt gcggaccatccacatattgctcgcgaacttgaagcacttgcaactttgtaccagaaacaa aataaatatgaacaagctgaacattttagaaaaaaatcttttaaaattcgtcagaaagct acaaggagaaaaggcaacttgtatggatttgcccttttacgtagacgggccctacagtta gaagagctcacgttaggtaaggatacacctgacaatgctcggaccctcaatgaactgggt gtgctctactatcttcagaacaacctggaaacagctgaccagtttctgaagcgttccttg gagatgagggagcgagttctaggaccagatcaccctgactgtgcccagtctttgaataat ctggcggctctatgcaatgaaaagaaacagtatgataaagcagaagaactttatgaaaga gccttagacattcggagacgagcattagctcctgatcacccttctttggcttatacagtg aagcatcttgcagtcttgtataagaaaatggggaaacttgacaaagctgtacctttgtat gagctggctgttgaaatccggcagaaatcctttggcccaaagcaccctagtgtagctact gccttggtgaacttagctgttctttatagccaaatgaaaaaacacattgaggccttgccg ttatatgaaagagcattaaagatttatgaggacagcctgggtcggatgcatcctcgagtt ggagaaacattaaaaaatttagctgtgcttagctatgaagaaggggatttcgaaaaagct gctgaactatacagaagggcaatggaaataaaagaagcagaaacatctcttttgggtgga aaagctccttcccgacattcatcaagtggagatacggttagcttaaaaacaacccattct cctaatgttttccttcatcaaggacaaagcagcagtctggcccagttctctacctcaaag aaaagtttcaaggagtaa

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