Phocoena sinus (vaquita): 116752793
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Entry
116752793 CDS
T07759
Name
(RefSeq) LOW QUALITY PROTEIN: farnesyl pyrophosphate synthase-like
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00900
Terpenoid backbone biosynthesis
psiu01100
Metabolic pathways
psiu05164
Influenza A
psiu05166
Human T-cell leukemia virus 1 infection
Module
psiu_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
116752793
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
116752793
05164 Influenza A
116752793
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
psiu01006
]
116752793
Enzymes [BR:
psiu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
116752793
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
116752793
Prenyltransferases [BR:
psiu01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
116752793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
116752793
NCBI-ProteinID:
XP_032485599
LinkDB
All DBs
Position
4:complement(7280455..7293722)
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AA seq
493 aa
AA seq
DB search
MKWDASGRQLEGYRDPGELEGPGFPVTYVEAQGHSSSSKFEILRTPVLVGEGPIVLQYDL
ILISYIRSGSGSQKGHTVKYWELGLQHMHFGETQFKRQNYCGLPCPRQIKTYSDNQQLAS
GNRVFYSSLRIDGDQKLDVYAERQDFIQHLSQVVKVLTEEDTGHPETGDAIARLKEVLEY
CAIRGKYHRGLTVLVAFWELSEPRKQDADSLRWAMTEGWCVELLQAFLLVSDDLTDAFFT
RRGRICWYQKPCIGLAAIHDAFLLEACIYRLLKLCCWEQPYYLNLIELFLQSPYQTEIGQ
TLDLITAPQDSVDLGRFTEKGYRSIVKYKTAFYSFCLSIAAAMYVVGIDGKKEHTDAKKI
LLEMGEFFRIXDENLDLFGDPSVMGKIGTDIQDNKCSWLVVQCLQRASPDQCQILQENFG
XAEKVAGVKAPDEEMNLLAVFTQHKEDSYSYLTGLTEQYAVPLSPATILGPAHKIYKQKK
PPKSHMNAVILPT
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgggatgctagcggaaggcagttggaaggctacagggacccaggagaactagaa
ggacctggatttccagttacgtacgtcgaagcccaaggccattcaagttcaagcaagttc
gagatccttaggacacccgtcctagtgggcgaggggcccatcgtactccagtatgacctc
atcttaattagctacatccgcagtggctctggttcccagaaaggccacactgtgaagtac
tgggagttaggacttcagcatatgcattttggtgagacacaattcaagcgacagaactac
tgtggtctcccttgcccccggcagattaagacctacagtgacaatcagcaactggcatct
gggaacagagtattttactcctccctcagaatagatggagaccagaaattggacgtttat
gcagaaaggcaggatttcatccagcacttgtcccaggttgtcaaggtgctgactgaggag
gacactgggcacccagagacaggagatgctattgcccgactcaaggaggtcctggagtac
tgtgccatccgaggcaagtaccatcggggtttgacggtgctggtagcattctgggagctg
tcggagcccaggaagcaagatgctgacagtctccggtgggccatgactgagggctggtgc
gtggaactgctccaagccttcctcttggtgtcagacgacctcacggatgcattcttcacc
cgacgggggcggatctgctggtatcagaagccatgcataggtttggctgccattcatgat
gctttcctcttggaagcatgtatctaccgcctgctgaagctctgctgctgggagcagccc
tattacctgaacctgattgagctcttcctacagagtccttatcagactgagatcggacag
accctggacctcatcacagccccccaggacagtgtggatcttggcagattcactgaaaag
gggtacagatctattgtcaaatacaagacagctttctactccttctgtctttctatagct
gctgccatgtatgtggtgggcattgacgggaagaaggagcataccgatgccaagaagatc
ctgctggagatgggagagttctttcggatttaggatgaaaacctcgatctctttggggac
cccagtgtgatgggcaagatcggcactgacatccaggacaacaagtgcagctggctggtg
gttcagtgtttgcaacgggcctctccggaccagtgccagatcctgcaggagaactttgga
nnggccgagaaggtggccggggtgaaggcgccagacgaggagatgaatctgctggctgtg
tttacacagcacaaggaagacagttacagctaccttacgggtctcacggagcagtatgct
gtgcccctgtccccagccaccatcctggggccagcacacaagatctacaagcagaaaaaa
ccccctaaaagtcacatgaatgcagttatccttccaacttag
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