Phocoena sinus (vaquita): 116752813
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Entry
116752813 CDS
T07759
Symbol
APP
Name
(RefSeq) amyloid-beta precursor protein isoform X1
KO
K04520
amyloid beta A4 protein
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04726
Serotonergic synapse
psiu05010
Alzheimer disease
psiu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
116752813 (APP)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
116752813 (APP)
05022 Pathways of neurodegeneration - multiple diseases
116752813 (APP)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psiu01002
]
116752813 (APP)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
psiu00535
]
116752813 (APP)
00536 Glycosaminoglycan binding proteins [BR:
psiu00536
]
116752813 (APP)
Peptidases and inhibitors [BR:
psiu01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
116752813 (APP)
Proteoglycans [BR:
psiu00535
]
Cell surface proteoglycans
Others
116752813 (APP)
Glycosaminoglycan binding proteins [BR:
psiu00536
]
Heparan sulfate / Heparin
Others
116752813 (APP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
Spore_III_AB
Motif
Other DBs
NCBI-GeneID:
116752813
NCBI-ProteinID:
XP_032485667
Ensembl:
ENSPSNG00000014377
UniProt:
A0A8C9E4Y9
LinkDB
All DBs
Position
4:complement(126939533..127222949)
Genome browser
AA seq
767 aa
AA seq
DB search
MLPGLALVLLAAWTARALEVPTDGNAGLLAEPQVAMFCGKLNMHMNVQNGKWESDPSGTK
TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRGRKQCKTHAHIVIPYRCLVG
EFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEKSTNLHDYGMLLPCGIDKFR
GVEFVCCPLADESDNIDSADAEEDDSDVWWGGADTDYADGSEDKVVEVAEEEEVADVEEE
EAEDEEDGDEVEEEAEEPYEEATERTTSVATTTTTTTESVEEVVREVCSEQAETGPCRAM
ISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSVMSQSLLKTTQEPLPQDPVK
LPTTAASTPDAVDKYLETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNL
PKADKKAVIQHFQEKVESLEQEAANERQQLVETHMARVEAMLNDRRRLALENYITALQAV
PPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQ
SLSLLYNVPAVAEEIQDEVDELLQKEQNYSDDVLTNMISEPRISYGNDALMPSLTETKTT
VELLPVNGEFSLDDLQPWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTNIKT
EEISEVKMDAEFRHDAGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVML
KKKQYTSIHHGVVEVDAAVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccggtttggcactggtcctgctggccgcctggactgctcgggcgctggaggtg
cccactgatggcaatgctggcctgcttgcagaaccgcaagtcgccatgttctgtggcaaa
ctgaacatgcacatgaacgtgcagaatggcaagtgggagtcagatccatcggggaccaaa
acctgcattggcaccaaggagggcatcctgcagtactgccaagaagtctatcctgaactg
cagatcaccaatgtggtggaagccaaccaaccagtgaccatccagaactggtgcaagaga
ggccggaagcagtgcaagacccatgcccacattgtgattccctaccgctgcttagttggt
gagtttgtaagcgatgccctcctcgttcccgacaagtgcaaattcttacaccaggagagg
atggatgtttgtgaaacccaccttcactggcacaccgttgccaaagagacctgtagtgag
aagagtaccaacttgcatgactatggcatgctgctgccctgtggaattgacaagttcaga
ggggtggagtttgtttgttgcccactggccgacgaaagtgacaatattgactcagcagat
gcagaggaggatgactcggatgtctggtggggtggagcagatacagactatgcagatggg
agtgaagacaaagtcgtggaagtagcagaggaggaagaggtggctgatgttgaggaagag
gaagccgaggatgaagaggatggtgatgaggtagaggaagaagcggaggagccctatgaa
gaggccacggagaggaccaccagcgtcgccaccaccacgaccaccaccacggagtctgtg
gaagaggtggtccgagaggtgtgctctgaacaagccgagacggggccatgccgagcaatg
atctcccgctggtactttgatgtgactgaagggaagtgcgccccgttcttttacggcgga
tgtggcggcaaccgaaacaactttgacacagaggagtactgcatggccgtgtgtggcagc
gtcatgtcccaaagtttactcaagaccacccaggaacctcttccccaagatcctgttaaa
cttcctacaacagcagccagcacccctgacgccgttgacaagtatctcgagacacctgga
gatgagaatgaacatgcccatttccagaaagccaaagagaggcttgaggccaagcaccgc
gagaggatgtcccaggtcatgagagagtgggaagaggcagagcgtcaagcaaagaacttg
cctaaagctgataagaaagcagtgatccagcatttccaggaaaaggtggagtctctggag
caggaagcagccaacgagagacagcagttggtggagacgcacatggccagagtggaagcc
atgctcaatgaccgccgccgcctagccctggagaattacatcaccgctctgcaggctgtg
ccgcctcggcctcgtcatgtgttcaacatgctaaagaagtatgtccgtgccgaacagaaa
gatagacagcataccttaaagcattttgaacatgttcgcatggtggatccaaagaaagct
gctcagatccggtcccaggttatgacacacctccgcgtgatttacgaacgcatgaaccag
tctctctctctgctctacaatgttcctgctgtggccgaggaaattcaggatgaagttgat
gagctgcttcagaaagagcagaactattcggacgatgtcttgaccaacatgatcagcgaa
ccaaggatcagttatggcaatgatgctctcatgccatctttgactgaaaccaaaaccact
gtggagcttcttcccgtgaatggagagttcagcctggatgatcttcagccctggcatcct
tttggggtcgactctgtgcccgccaacacagaaaacgaagtcgagcctgttgacgcccgc
cctgccgccgaccgaggactgaccactcgaccaggttcggggttgacaaatatcaagacg
gaagagatttcggaagtgaagatggatgcagagttccgacatgatgcaggatatgaagtt
catcatcaaaaattggtgttctttgcagaagatgtgggttcaaacaaaggtgcaatcatt
ggactcatggtgggcggtgttgtcatagcaacagtgattgtcatcaccctggtgatgcta
aagaagaaacagtacacgtccatccatcatggtgtggtggaggttgacgctgctgtgacc
ccagaggagcgccacctctccaagatgcagcagaatggctacgaaaacccaacttacaag
ttctttgagcagatgcagaactag
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