Phocoena sinus (vaquita): 116752842
Help
Entry
116752842 CDS
T07759
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116752842 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116752842 (DHX36)
03012 Translation factors [BR:
psiu03012
]
116752842 (DHX36)
Enzymes [BR:
psiu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116752842 (DHX36)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
116752842 (DHX36)
Translation factors [BR:
psiu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
116752842 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
PhoH
nSTAND3
ATPase
AAA_34
DUF6782
NPHP3_N
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
116752842
NCBI-ProteinID:
XP_032485758
Ensembl:
ENSPSNG00000017807
UniProt:
A0A8C9CQ53
LinkDB
All DBs
Position
4:complement(33892791..33943011)
Genome browser
AA seq
1014 aa
AA seq
DB search
MSYDYHQNWGRDGGGRDGGSRSSGGGYGGSYGGGHGGNRGSGGGGGGGGGGGGRGGRGRH
PGHLKGREIGLWYAKKQGQKNKEAERQERAVVHMDERREEQIVQLLHSVQAKNDKDSEAQ
ISWFAPEDHRYGTDAPAENKPNSVKKVEDQEKKLINQEKRPFRIRDKYIDRDSEYLLQEN
EPDVTLDQQLLEDLQKKKTDLRYIEMQHFREKLPSYGMQKELVNMIDNHQVTVVSGETGC
GKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQI
RLQSRLPRKQGSILYCTTGIILQWLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLL
NYRPDLKIVLMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKTRYVPEQKEH
RSQFKRGFMQGHVNRQEKEEKEAIYKERWPGYVRELRKRYSPSTIDVIGMMDDDKVDLNL
IAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQT
QVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKA
NAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYF
LSRLMDPPSNEAVLLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCC
LDPVLTIAASLSFRDPFVIPLGKEKVADARRKELAKDTKSDHLTVVNAFEGWEEARQRGF
RYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPKSNINSDNEKIIKAV
ICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAIHPKSVNVEQTEFHYNWLIYHLKMRT
SSIYLYDCTEVSPYCLLFFGGDISIQKDNDQETIAVDEWIIFQSPARIAHLVKELRKELD
ILLQEKIESPHPVDWKDTKSRDCAVLSAIIDLLKTQEKATPRNLPPRFQDGYYS
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgactaccatcagaactggggccgcgatggcgggggccgcgatggcgggtcc
cgcagctccggcgggggttacggaggaagctatggagggggccacggagggaatcgaggc
tccggaggtggcggcggcggcggaggaggagggggtggtcgaggcggccgaggccgacat
cccgggcacctgaaaggccgcgaaatcggcttgtggtacgcgaagaaacaaggccagaag
aacaaggaagcggagaggcaggagagagctgtggtacatatggatgaacgtcgagaagaa
caaattgtgcagctgctgcattctgtgcaggctaagaatgataaagattcggaagcacag
atatcctggtttgctcctgaagatcacagatatgggactgatgctcctgctgagaacaaa
ccaaactcagtaaagaaagttgaggatcaggaaaaaaaattgataaatcaagaaaagagg
ccatttagaatcagggacaaatatattgaccgcgattctgaatatctcttgcaagaaaat
gaaccagatgtaactttagaccaacaattattggaagatttacaaaagaaaaaaactgac
cttcggtatattgaaatgcagcatttcagggaaaagctgccttcatatggaatgcaaaag
gaattggtaaatatgatcgataaccatcaggtaacagtagtaagtggtgaaactggttgt
ggaaaaaccactcaagttactcagttcattttggataactacattgaaagaggaaaagga
tctgcatgcaggatagtttgtactcagccaagaagaattagtgccatttcagttgcagag
agagtggctgcagaaagggcagaatcttgtggcaatggtaatagtaccggataccaaatt
cgtctccagagtcggttgccaaggaaacagggttctatcttatattgtacgacaggaatt
atccttcagtggcttcagtcagacccgcatttgtccagtgttagtcatatcgtgcttgat
gaaatccatgagagaaatctacagtcagatgttttaatgactgttgttaaagatcttctc
aattatcgacctgacctgaaaatagttttgatgagtgcaacattgaatgctgagaaattt
tcagaatattttggtaactgtccaatgatacatatacctggttttacttttccggttgtg
gagtatcttttggaagatataattgaaaaaacaagatatgttccagaacaaaaagaacac
agatcccagtttaagaggggtttcatgcaagggcatgtaaatagacaagaaaaagaagaa
aaagaagcaatctataaagaacgctggccaggttatgtaagggaattgcgaaaaaggtat
tctccaagcactatagatgttataggaatgatggatgatgataaagttgatctgaatttg
attgctgcccttattcgatacattgttttggaagaagaggatggtgcaatattggtcttt
ctaccaggttgggacaatatcagtactttacatgatctcttgatgtcacaagtgatgttt
aaatcagacaggtttcttattatacccttacattcactgatgcctacagttaaccagaca
caggtatttaaaagaacccctcctggtgttcggaaaatagtaattgctaccaacattgca
gagactagcattaccatagatgatgtagtttatgtaatagatggaggaaaaataaaggag
acacactttgacacacagaacaacatcagtacaatgtctgctgagtgggttagtaaagct
aatgctaaacaaaggaaaggtcgagctggaagagttcaacctggtcattgctatcatctg
tataatggtcttagagcaagccttctagatgactatcaactgccagaaattttgagaacg
cctttggaagaactttgtttacaaataaagattttaaggctaggtggaattgcttacttt
ctgagtaggctaatggatccaccatcgaatgaagcagtgttactttccataaaacacctg
atggaactgaacgctttggataaacaagaagaattgacacctcttggagtccacttagca
cgattaccagttgagccacacattggaaaaatgattctttttggagctctgttctgttgc
cttgacccggtgctcaccattgctgctagtcttagcttcagagatccctttgtgattcca
ctgggaaaagaaaaggtcgcagatgcaagaagaaaggaattggcaaaggatactaaaagt
gatcacctgacagttgtgaatgcatttgagggctgggaagaagctagacaacgtggtttc
agatatgaaaaagactattgctgggaatattttctgtcttcaaacacactgcagatgctg
cataacatgaaagggcagtttgctgagcatcttcttggagctggatttgtaagcagtaga
aatcctaaagatccaaaatctaatataaattcagataatgagaagataattaaagctgtc
atctgtgctggtttatatcccaaagttgctaaaatccgactaaatttgggtaaaaaaaga
aaaatggtgaaagtttacacaaaaactgatggactagttgctattcatcccaaatccgtt
aatgtggagcaaacagaatttcattacaactggcttatctatcacctgaagatgagaaca
agtagtatatacttgtatgactgcacagaagtttctccatactgtctcttgttctttgga
ggtgatatttccattcagaaggataatgatcaggaaactattgctgtagatgaatggatt
atctttcagtctccagcaagaattgcccatcttgttaaggaattacgaaaagaactagat
atccttctgcaagagaagattgaaagtccccatcctgtagactggaaggacactaaatcc
agagactgtgcagtactctcagctattatagacttgctcaaaacacaggaaaaagcaact
cccaggaacttgccaccacgatttcaggatggatattacagctga
DBGET
integrated database retrieval system
