Phocoena sinus (vaquita): 116752852
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Entry
116752852 CDS
T07759
Symbol
IMPG2
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2 isoform X1
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
psiu00536
]
116752852 (IMPG2)
Glycosaminoglycan binding proteins [BR:
psiu00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
116752852 (IMPG2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
EGF
S1_2
Motif
Other DBs
NCBI-GeneID:
116752852
NCBI-ProteinID:
XP_032485798
Ensembl:
ENSPSNG00000002397
LinkDB
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Position
4:96119085..96197800
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AA seq
1254 aa
AA seq
DB search
MIMFPHFGKISLGILIFVLIEGNLPSLTAQTDLSLEESQEPKSTVSFLLTDSESTDSSLS
IEKKQPMDHRETERQWLLRRKRSTLFPNGVKTCPDENVTEAVANHVKYFKVRVCQEAVWE
AFRTFWDRLPGREEYHYWMNLCEDGITTIFEMGTHFSQSVEHRSLIMKKLTYTKETVSSP
ELSSPVPVGDTSTLGGASLSVPYPGATFYEGISESSLERPEESISNEIENVIEESTKPAV
EQVAEFSIHLLGEQYNEELQDPYSFHHQRLVEEFISEVEDAFTGLLGYKDIHVLDFRSPK
ENGSGIDVHYAVTFNGDAISNTTWDLISLHSNKVENHGLVELDDKPTAVYTISNFRDYIA
ETLHQNVLLGTSSLNLDPDSLQLIDVRGVLLPQSEDQVWNTQSSSLQETLPSILDNTPQA
EWPSADEFTMSSISPLDFSSGPPSATGRELWSESPLGDLVSAPKLAFPSKVSLSSSPEVL
EVSSLTLHSVTPAVLQTGLPVASEERTSGSHSLEDGLTKVKGSEDFLSVDPLPSSPFSRP
MPKEIIPSMEDSGVSLTSSPYPVSSVTFDILAKEVTTPFGMDSLASKVKGQLEVSTWMPD
TSMEKEFIFESGLGSGSGQKVGLITWPRSKTSLEKSTEPFSKSWLEAEDSEDLLLPTEDI
DEKLDIDDRIDSIDQSTEHSKYGHFDRSRDFAEDETLGGPTVSIFAETTTQSASPVLSKH
TSEVPDIDYYSVTKSPPLLTSAAISASTDKPIQEEPFLKEDMEQTTESSNREWFDSKISV
VKPDVQPLWTILPESDVVWVRTSSLEKLSRDTLASTPQSTDKLWLKASMTQSTKLPSTTS
STLLEDEVIMGVQDISLELDQIGTDYYHPELIPEENGKVGGYVEMSTSIHSTEMAIVAQP
TKSEDLSHTQAAGALVVFFSLRVTNMMFSEDLFNKNSLEYKALEQRFLELLVPYLQSNLT
GFQNLEILNFRNGSIVVNSRMKFAKSVPPNVTNTVYVILEDFCTTAYQTMNLAIDKYSLD
VESGDQANPCKFQACNEFSECLVNPWNGEAECRCYPGYLSVEELPCQSLCDLQPDFCLND
GKCDIMPGHGAICRCRVGENWWYRGEHCEEFVSEPLVIGITIASMVGLVLISSAFVFFLI
RTLQAQYVRRERERPFSRQPDSLSSVERAVKHNPMFESHGADLEQYEGPYPQRPFYSSTG
REMIAGLSREEIRQMYENSELSREEIQERMRILELYARDPEFAAFLREHQMEEL
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgattatgtttcctcattttgggaagatttctctgggtattctgatatttgtcctgata
gaaggaaaccttccatcattaacagcacaaaccgacttatctttagaagagagccaagaa
cccaagagtacagtttcttttctcctgactgactcagaatccacagactcttctctgtct
atcgaaaagaaacaacctatggaccacagagaaactgagagacagtggttgctcagaaga
aagcgatctactctgtttcctaatggtgtgaaaacctgcccagatgaaaatgttacagag
gctgtggcaaaccatgtgaaatattttaaagtccgagtatgccaggaagctgtctgggaa
gccttcaggactttttgggatcgacttcctgggcgtgaagaatatcattactggatgaat
ttgtgtgaggatggaatcacaactatatttgaaatgggcacacattttagtcagtctgtg
gaacatagaagcttaattatgaagaaactgacatacacaaaggaaactgtaagcagccct
gaattgtcatctccagttcctgttggtgatacctcaacattgggaggtgccagtctcagt
gttccatatccaggggcgaccttctatgaaggtatctcagagagcagcttggagaggcca
gaagagagtattagcaatgaaattgagaatgtgatagaagagtccacaaaaccagcagtg
gagcaggttgcggaattcagtatccaccttttgggggaacaatacaatgaagaactacag
gatccctacagctttcaccaccagcgccttgtagaagagtttatttcagaggtggaagat
gcatttactgggctactgggctacaaggacattcatgtacttgactttagatcccctaag
gaaaatggcagtggcatagatgttcactatgcagttaccttcaatggtgatgccatcagc
aataccacctgggacctaattagccttcactccaacaaggtggagaaccatggtcttgtg
gaattggatgataagcctactgctgtttatacaattagtaacttcagagattatattgct
gagacactgcaccagaatgttttgctggggacctcctctttgaatctggatcctgactcc
cttcagcttattgatgtgagaggagttttacttccccaaagtgaagaccaagtttggaac
acccaaagttcaagtcttcaggaaaccttaccatctattctggataatacccctcaagct
gaatggccctcagcagatgaattcaccatgagcagtatttcaccacttgatttcagctct
ggtcctccttcagccactggcagggaactctggtcagaaagccctttgggtgatttagtg
tctgcacccaaattagcctttccctcgaaggtgagcctcagttcttccccagaggtttta
gaggttagcagcttgactcttcattctgtcaccccagcagtgcttcagactggcttgcct
gtggcttctgaagaaaggacttctgggtctcactcattagaagatggattaactaaagtt
aaagggtcagaagattttctttctgttgatccactgccttcaagcccatttagtcgtcct
atgccaaaagaaataataccatccatggaagactcgggggtgtctttgacatcctcacca
tatccggtctcctctgtcacattcgatattcttgctaaagaagtaactacaccttttggc
atggactctttggcctccaaagtcaaaggccaattagaagtgagcacttggatgccagac
acatctatggagaaagagttcatatttgagagtggtttaggttcagggtctgggcaaaag
gtaggtctgattacttggccacggagcaagacttcattagagaagagcactgaaccattt
tccaagtcatggcttgaagctgaggattcagaggacttacttttgccaactgaggatata
gatgagaaactagatatagatgacagaatagattccatagatcaaagtactgagcattca
aaatatgggcattttgatagatccagagactttgcagaggatgagacccttggtggacct
actgtgtccatctttgcagagaccacaactcagtctgcatctccagttctatccaagcac
acatcagaagtacctgacattgactattattcagttaccaaatcacctcctctactgaca
tctgcagcaatctctgcttctactgataaaccaattcaagaagaaccctttctaaaggag
gatatggaacaaactacagagtcatccaaccgtgaatggtttgacagcaagatttcagta
gtgaagccagatgtgcaacctttgtggaccatattgccagaatcagatgtagtttgggta
agaacttcttccctagagaagctgtccagagacacattggcaagtacaccacagagtact
gacaagctctggctgaaagcttccatgacacagtctaccaaattgccttcaaccacaagt
tccaccctgctggaagatgaagtcattatgggcgtacaggatatttcattagaactggac
cagataggcacagattactatcatcctgagctaatcccagaggaaaatggcaaggttggt
ggttatgtggaaatgtccacaagtattcactccacagagatggctattgtggctcagcca
acaaaaagtgaagacttgagtcatacccaagccgcaggagccttggtggttttcttcagc
ctcagagtgacgaacatgatgttttcagaagatctgtttaataaaaactctttggagtat
aaagccctggagcaaagattcttagaactgctggttccctatctccagtcaaatctcact
gggttccagaatttagaaatcctgaacttcagaaatggcagtattgtggtgaacagccga
atgaagttcgccaagtctgtccctcctaatgtcaccaatactgtatacgtgattctggaa
gacttttgcaccactgcttaccaaaccatgaacttggctattgataaatactccctcgat
gtggaatcaggtgatcaagccaacccttgcaagtttcaagcatgcaatgaattttccgag
tgtttggtcaacccctggaatggagaagcagagtgcaggtgctaccctgggtacctgagt
gtggaagagctgccctgtcagagtctctgtgacctacagcccgacttctgcttgaatgat
ggaaagtgtgacatcatgcctgggcatggggccatttgtaggtgccgggtgggcgagaac
tggtggtatcgaggtgagcactgtgaggagtttgtgtccgagcccttggtgataggcatc
accatcgcctccatggttggacttgtcctcatttcttctgctttcgtcttcttcctcatc
aggactcttcaagctcaatatgttaggagagaaagagagagacccttcagcaggcagcct
gacagcctctcgtctgtggaaagagctgtaaagcacaaccccatgtttgaaagtcacggg
gctgatctcgagcagtacgaaggaccttaccctcagcggcccttctacagctccacaggc
agagagatgattgctggtctgagcagggaagaaatcagacaaatgtatgagaacagtgag
ctttccagagaggaaattcaagaaagaatgagaattttggaactgtatgccagggatcct
gagtttgcagcttttctgagagaacatcaaatggaagagctttaa
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