Phocoena sinus (vaquita): 116752858
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Entry
116752858 CDS
T07759
Symbol
RRP1B
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B
KO
K14849
ribosomal RNA-processing protein 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psiu01009
]
116752858 (RRP1B)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psiu03009
]
116752858 (RRP1B)
Protein phosphatases and associated proteins [BR:
psiu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116752858 (RRP1B)
Ribosome biogenesis [BR:
psiu03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
116752858 (RRP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
TAN
Motif
Other DBs
NCBI-GeneID:
116752858
NCBI-ProteinID:
XP_032485818
Ensembl:
ENSPSNG00000010341
LinkDB
All DBs
Position
4:143684717..143714701
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AA seq
739 aa
AA seq
DB search
MAPAMQPAEIQFAQRLASHEKGIRDRAVKKLRQYISVKTQRETGGFSQEELLKIWKGLFY
CMWVQDEPLLQEELANTISQLIHVVNNSEAQHLFIQTFWQTVNREWPDIDGLRLDKYHML
IRLVLRQSFEVLKRNGWEESRIKLFLDVLMKEILHPESQSPNGVKFHFIDIYLDELSKVG
GKELLADQNLKFIDPFCKVAAKTKDQTLVQTIARGVFEVIVDQSPFAPEETVEEQKTKVG
DSDLSEEETSGNEMTWRKAISRKKTALGRYHCRKEGVAEEGRRGGCGGVEDAGLLLQFDY
KAVADRLLEITSRKNTPPFNRKRLSKLVKKRMKDRVSLGSVLVFCFRFQDLSEGSLSHLS
FAEDASADEDDQSLSQGRHKKKGNKLLEETDMERGKGAKFSPAEEEESAGSVPKRKRKKK
KKNHLRPEHLGPGGEATCLEQNGSRQPEAGPGRAQEASVAELGTVATSCPREQSGSEPAS
VHSRRRRLRKRSLKVQVESPEAAALAGGAPVLKRTRELGALLVNGGGPPTLAWPLPPPAS
PADRGDCPAILPQGGKLKKRRRESGGHDLHDLSAQKAAVLKKRKKVKEMSKWAEHRGVKL
VQALGSGGALSPLRKQLRTQRDFVKFDASSSPKPLFFRKAKGSGAATSPGPGLQPHRTPS
SSKKVTFGLNRNTTAEFKKTDKSILVSPTGPSRVAFNPEQRPLHGVLKTPSSSPASTPLG
TKKPLTSTPKRRPTAIDFF
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgccatgcagccggccgagatccagttcgctcagcgcctggcgtcccacgag
aagggcatccgggatcgggcggtgaagaagctgcgccagtatatcagcgtgaagacgcag
agggagacaggaggtttcagccaagaagaacttctaaaaatatggaaagggctcttctat
tgcatgtgggtgcaggatgaaccccttctacaggaggagctagcgaacactatatcccaa
ctcatccatgttgttaacaactcagaggctcagcacctgttcatccagaccttctggcaa
actgtgaaccgggagtggccggacatcgacgggctgcgtctggacaagtaccacatgctg
atccgtctggtcctgaggcagtcctttgaagttctgaagcgaaacggctgggaagaaagc
cgaatcaagcttttcctggacgtcttgatgaaggagatcctacatcctgagagtcagtct
ccgaacggagtgaaattccacttcattgatatctatctggatgaactgtccaaggtggga
gggaaagagctgctggccgatcagaacctcaagtttattgacccattctgcaaggtggcc
gccaagactaaggaccagactctggtacagactatagctaggggtgtttttgaagtcatt
gtagatcagtctccttttgcacctgaagagacggtcgaggaacagaaaaccaaagtgggt
gacagtgacctctctgaggaagagacgtctggaaatgagatgacgtggagaaaagcaatc
agtagaaagaaaacagcactgggcagatatcactgcaggaaagagggagtcgctgaggaa
ggcagacggggcggctgcggaggcgtggaggacgccgggctgcttctccagtttgactac
aaggcagttgccgaccgactcctggaaataaccagcaggaagaacacccctcccttcaac
aggaaacgtctctccaagctagtcaaaaagagaatgaaagacagggtttctctaggaagc
gttcttgtgttctgtttcagattccaggatctttctgaaggcagtctctctcacctcagt
tttgctgaggacgcttctgctgacgaagatgaccaaagcctcagtcaagggaggcataag
aagaaagggaacaaacttctggaggaaacggacatggaaagagggaaaggagccaagttc
tctcctgccgaggaagaggagagcgcaggcagtgttccaaagagaaaaaggaaaaagaag
aagaagaaccacctccggcctgaacacttggggccgggtggtgaggccacgtgcctggag
cagaatggcagccgacagccggaggccggtcccggaagagcccaggaggcgagtgtggct
gagctggggacggtggccacgtcctgcccccgggagcagagcggctccgagcccgcctcc
gtgcacagcaggaggagacgactgaggaagagaagcctgaaggtccaggtggagagccca
gaggcagcggccctggctggcggcgccccggtcctgaagaggacgcgcgagctcggcgcc
ctcctggtcaacggcggcggcccgcccacgctggcctggcccctgccccctccagcgagc
ccagcagacagaggggactgccctgccatcctgccccagggcgggaagctgaagaaaagg
aggagggagtctggcggccatgacctccacgacctgtctgctcagaaagctgccgttttg
aaaaagaggaagaaagtgaaagagatgtcaaagtgggcggagcacagaggggtcaagctt
gtgcaggccctggggagcggtggggcgctcagccctttgaggaagcagctgaggacccag
agggacttcgtgaagtttgacgcctcctcctccccgaagcccctgttcttcaggaaggcc
aagggcagcggggccgccacctcgccaggccccgggctgcagccacacaggacgccgtcc
agctccaagaaggtgacgttcgggctgaacaggaacacgacggcggaattcaagaagacg
gacaagagcatcttggtcagtcccacgggcccctcccgggtggccttcaaccctgagcag
agacccctccacggagtgctgaagacccccagcagctcgccggccagcacgcccctgggg
accaagaagccgctgaccagcacgccaaagaggaggccgacggctatagacttcttctag
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