Phocoena sinus (vaquita): 116752869
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Entry
116752869 CDS
T07759
Symbol
TRAPPC10
Name
(RefSeq) trafficking protein particle complex subunit 10 isoform X1
KO
K20307
trafficking protein particle complex subunit 10
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116752869 (TRAPPC10)
Membrane trafficking [BR:
psiu04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
116752869 (TRAPPC10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
SNAP
NTS_TR130
Motif
Other DBs
NCBI-GeneID:
116752869
NCBI-ProteinID:
XP_032485857
Ensembl:
ENSPSNG00000010640
LinkDB
All DBs
Position
4:144012246..144113063
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AA seq
1264 aa
AA seq
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MDAPEEPVPPVIYTMENKPIVTCAGDQNLFTSIYPTLSQQLPREPMEWRRSYGRAPKMIH
LESNFVQFKEELLPKEGNKALLTFPFLHIYWTECCDTEVYKATVKDDLTKWQNVLKAHSS
VDWLIVVVENDAKKRNKTNILPRTSIVDKIRNDFCNKQSDRCVVLSDPLKDSSRTQESWN
AFLTKLRTLLLMSFTKNLGKFEDDMRTLREKRTEPGWSFCDYFMVQEELAFVFEMLQQFE
DALVQYDELDALFSQYVVNFGAGDGANWLTFFCQPVKSWNGLILRKPIDMEKRGLIQRQE
ATLLDLRSYLFSRQCTLLLFLQRPWEVAQRALELLHGCVQELKLLEFCRDWVSVPPGALD
CWVFLSCLEVLQRIEGCCDRAQIDSNIAHTVGLWSYATEKLKSLGYLCGLVSEQGPNSED
LNRTVDLLAGLGAERPETANTAQSPYKKLKEALSSVEAFEKHYLDLSHATIEMYTSIGRI
RSAKFVGKDLAEFYMRKKSPQKAEIYLQGALKNYLAEGWALPITHTRKQLAECQKHLGQI
ENYLQTSSLLASDRHLTGNEREYFCREILSFASQQADSPGHKIVLPMHSFAQLRDLHFTP
SNAVVHVGGVLSVEITVCSQMPVPVHAEQIAISVHFSIEKNNYRKTAEWLTKHKTANGIV
SFPAETSPFPTSQNSLPALELCEMFERSPSDNSLHTTGIICKNVHVLLRKQESGASLEAP
SGAALEAGAHVLKCNAVTLEPGPNAITFRTQAKEPGTYTLRQLCASVGPVWFVLPHIYPL
VQYDVYSQEPQLHVEPLADSLLAGIPQKVKFTVTTGHYTVKNGDSLQLSNVEAMLILGHE
ENRAVIYSNMREKASDAALRVQSSDKVTSISLPAAPAYHMIEFELEVLSLPSAPATGGES
TVPGMTEPHGKHKDTQKGGHCMATMDHKVSIDCPWSIYSTVISLTFSMPFRTTHSLLSSG
TRKYVQVCVQNLSELDFQLSDSHLVDTGDSTDLRLIPLNTESEQRIHSRQAVFFVWELKW
TQEPPPSLHCRFSVGFSPASEERLSVSLKPYTYEFQVDNFLTLYSVRAEISPPPGTELCK
TGSLCSLEVSITRLSDLSDADKDEALTEREDYFSTKLMYEVVDNSSNWAVCGKSSGVISM
PVAARATHRVHMEVMPLFAGYLPLPDVRLFKYLPHHSAHSSQLDADSWIENDSLSVDKHV
DDQLDSGSVQSRGSTRSVAGSEHKGLPMPRLRALPPGQAFNASAGTQVLVIPSQDDHVLE
VSVT
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggacgcccctgaggagccggtgccgccggtgatctacaccatggagaacaagcccatc
gtcacctgtgctggagatcagaatttatttacctctatttatccgacgctctcccagcag
cttccaagagaaccgatggaatggagaaggtcctatggccgagctccaaagatgattcac
ctagaatctaactttgttcaattcaaagaggagctgctgcccaaagaaggaaacaaggct
ctgctcacattcccctttcttcatatttattggacggaatgctgtgatactgaagtgtat
aaagctacagtaaaagacgacctcaccaagtggcagaatgttctcaaagctcatagctct
gtggactggttaatagtggtagttgaaaatgatgccaagaaaagaaacaaaaccaacatc
ctgccccggacctctattgtggacaaaataagaaacgatttctgtaataaacagagtgac
aggtgtgtcgtgctctccgaccccttgaaggactcctcccgaactcaggaatcctggaat
gctttcctgaccaaactcaggacattgcttcttatgtcttttaccaaaaacctaggcaag
tttgaggatgacatgagaaccttgagggagaagaggactgagccaggctggagcttctgt
gactatttcatggtgcaggaggaacttgcctttgtttttgagatgctacagcagtttgaa
gatgccctggtgcagtacgatgaactggacgctctgttttctcagtatgttgtcaacttt
ggtgctggggatggtgccaactggctgacttttttctgccagccggtgaagagctggaat
ggattgatcctccgaaagcccatagatatggagaagcgcggattgatacagaggcaagaa
gccaccctgttagatctgcgcagttacctgttctctcgccagtgcaccctgctcctcttc
ctgcagaggccgtgggaggtggctcagcgcgccctagagctgctgcacggctgtgtgcag
gagctgaagctcttggaattttgcagagactgggtctccgtgccgcccggtgccctggat
tgctgggtgttcctgagctgcttggaggtgctgcagaggatagaagggtgttgcgaccgg
gcacagatcgactcaaacattgcccacactgtgggtctgtggagctatgccacagagaag
ctaaagtccttgggctatctgtgtggacttgtgtcagaacagggacctaactcagaagac
ctcaacaggacggttgatcttttagcgggcttgggagctgaacggcctgaaacagccaac
actgctcagagtccgtataagaaactcaaagaagcgttatcatcagtagaagcttttgaa
aaacactacttagacttgtcccatgccaccattgaaatgtatacaagtattgggagaatt
cgatctgctaagttcgttggaaaggatctggcggagttttacatgaggaagaagtctccc
cagaaggcagaaatctatcttcagggagccttgaagaattacctggctgagggctgggca
ctgcctatcacacacacaaggaagcagctagctgaatgtcagaaacaccttggacaaatt
gaaaactaccttcagaccagcagcctcctggccagcgaccggcacctgactgggaacgag
cgggagtacttctgcagagagattctcagcttcgccagccagcaggcagacagcccaggt
cacaaaatagtactccctatgcattcttttgcacaactgagagatctccattttacccct
tccaatgctgtggtccatgtgggtggtgtcttgtccgtggagataaccgtgtgcagtcag
atgcctgtgcctgtccacgcggagcagattgccatcagcgtccacttcagcatcgagaaa
aacaactaccggaagactgccgagtggctcaccaagcacaagacggccaacgggattgtc
agcttccctgcagagacctcgcctttccccacatcccagaacagcctgcccgcgctggag
ctctgcgagatgtttgagagaagtccttccgacaattccttgcacacgacagggattatc
tgcaaaaatgtccacgtgctcctaaggaagcaggagagtggcgcgtccctggaagcgccc
tcgggtgccgccctggaggctggggcccacgtgctgaagtgcaacgccgtgaccctggag
ccggggcccaacgcaatcacgttcaggacgcaggccaaggagccgggaacctacacgctg
cggcagctgtgcgcctcggtgggcccggtgtggttcgtccttcctcacatctacccgctg
gtgcagtatgatgtgtattcgcaggagccgcagctgcacgtggagccgctggccgatagc
cttttggctggtattcctcagaaggtcaagttcactgtcactactggccattatacagta
aaaaatggggacagccttcagctcagcaatgtagaagccatgcttatcctgggtcatgaa
gagaacagagcagtgatctactccaacatgagagaaaaggcttctgacgctgcgctccgg
gttcagtcgtctgacaaggtcacgagcatcagcctgccggctgcgcctgcataccacatg
atcgaatttgaactggaagttctctctttaccttcagctccagcaactggaggggagagc
accgtgccggggatgacagagccccatgggaagcataaggacacacaaaaaggtggccac
tgcatggctaccatggaccacaaagtgtccatcgattgcccgtggtccatctactccacc
gtcatctctctgacgttcagcatgcccttcaggaccacgcactccctgctgtcatccggg
acacggaaatatgttcaagtgtgtgtccagaatttgtcagaactcgactttcagctgtca
gatagtcatcttgtggatactggtgatagtaccgacctgcgactaataccgctgaacacg
gaatccgaacagcgcatccacagcaggcaggcggtgttctttgtctgggagctgaagtgg
acacaggagcctcccccctccctgcactgccggttctccgttggattctccccagcttct
gaggagcggctgtctgtctccttaaagccctatacttacgaatttcaagtggacaatttt
ttgaccttatacagtgtgagagcggagatatcgccccctccagggacagagctctgtaag
acaggctcgctctgctccttggaggtgtccatcacgcggctctcggacctctcggacgcg
gacaaggatgaggcgctgacggaacgtgaggactatttttcaacgaagcttatgtacgaa
gttgtcgacaacagcagcaattgggcagtgtgcgggaagagttccggggtcatctccatg
cctgtggctgctcgggccactcacagagtccacatggaggtgatgcccctctttgcgggt
tacctgcccctccccgacgtcaggctgtttaaatacctgccccatcactcagcgcactcg
tcacaactggatgctgatagctggatagaaaacgacagcctctcggtggacaagcacgtg
gacgaccagctggacagcggcagcgtccagagcaggggcagcacgcgctcggtggccggc
agcgagcacaagggcttgcccatgccccggctccgggcgctgccccccggccaggccttc
aacgccagcgcgggcacgcaggtcctggtcatccccagccaagacgaccatgttctcgaa
gtcagcgtcacgtga
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