Phocoena sinus (vaquita): 116752881
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Entry
116752881 CDS
T07759
Symbol
FMOD
Name
(RefSeq) fibromodulin isoform X1
KO
K08121
fibromodulin
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116752881 (FMOD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
psiu00535
]
116752881 (FMOD)
Proteoglycans [BR:
psiu00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
116752881 (FMOD)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_9
LRR_5
LRR_14
Motif
Other DBs
NCBI-GeneID:
116752881
NCBI-ProteinID:
XP_032485922
Ensembl:
ENSPSNG00000000771
UniProt:
A0A8C9DW32
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Position
1:153944989..153955575
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AA seq
389 aa
AA seq
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MQWASLLLLAGLCSLSRAQYEEDSHWWFHYLRNQQSTYYDPYDPYPYEPYEPYPYGGEES
PAYAYGSPPPPEPRDCPQECDCPPNFPTAMYCDNRNLKYLPFVPSRMKYVYFQNNQISSI
QEGVFDNATGLLWIALHGNQITSDRVGRKVFSKLRHLERLYMDHNNLTRMPGPLPRSLRE
LHLEHNQILRVPNNALEGLENLTALYLQHNEIQEVGSSVRGLRSLILLDLSYNHLRKVPD
GLPSALEQLYLEHNNVYSVPDNYFRGSPKLLYVRLSHNSLTNSGLASNTFNSSSLLELDL
SYNQLQKIPPVNTNLENLYLQGNRINDTIDLAPGLGSAPDLSTWRPLDPFPGTRKETSKS
IPGLHPHAAPSALQRRSSPSAASAPWWTS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgggcttccctcctgctgctggcagggctctgctccctttcccgggcccaatat
gaggaagactcccactggtggttccactacctccgcaaccagcagtccacctactacgat
ccctatgacccttacccttatgagccctatgagccttacccctacgggggagaggaaagt
ccagcctatgcctacggctctccacccccaccagagccccgcgactgcccccaggagtgc
gactgcccccccaacttccccacagccatgtactgtgacaaccgcaacctcaagtaccta
cccttcgtcccctcccgcatgaagtacgtctacttccagaacaatcagatctcttccatc
caggagggcgttttcgacaacgccactgggctgctctggattgctctccatggcaaccag
atcaccagtgatagggtgggcaggaaggtcttctccaagctgaggcacctggagaggctg
tacatggaccacaacaacctgacccggatgcctggcccactgcctcgatccctgagggag
ctccatctcgagcacaaccagatcttgagggtccccaacaacgcgctggaggggctggag
aacctcacggccttgtacctccaacacaacgagatccaggaagtgggcagttcggtgaga
ggcctccggtcactgatcttgctggacctgagttacaaccaccttcggaaggtgcctgat
ggactgccctcagcccttgagcagctgtacctagagcacaacaatgtctactcggtcccc
gacaactacttccgggggtcgcccaagctgctgtatgtgcggctgtcccacaacagtctc
accaacagtggcctggcctctaacaccttcaattccagcagcctccttgagcttgacctc
tcctacaaccagctacagaagatccccccagtgaacaccaacctggagaacctttacctc
caaggcaacaggatcaatgacaccatagacctggcccctggccttggctctgcccccgac
ctgtccacctggaggccacttgatccattccctgggaccagaaaggaaacatccaaaagc
attccaggtctccacccccacgccgcaccgagtgctctccaaagaaggagttctccatca
gcagcttctgcaccgtggtggacgtcgtga
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