Phocoena sinus (vaquita): 116752908
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Entry
116752908 CDS
T07759
Symbol
PLS1
Name
(RefSeq) plastin-1 isoform X1
KO
K17275
plastin-1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psiu04812
]
116752908 (PLS1)
04147 Exosome [BR:
psiu04147
]
116752908 (PLS1)
Cytoskeleton proteins [BR:
psiu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
116752908 (PLS1)
Exosome [BR:
psiu04147
]
Exosomal proteins
Exosomal proteins of microglial cells
116752908 (PLS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CH
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_FSTL1
EF_SSP120
CAMSAP_CH
EH
DUF5580
SPARC_Ca_bdg
EF-hand_EFHB_C
SAPC2_N
Motif
Other DBs
NCBI-GeneID:
116752908
NCBI-ProteinID:
XP_032485986
Ensembl:
ENSPSNG00000008996
UniProt:
A0A8C9BTQ0
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Position
4:23165375..23279764
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AA seq
630 aa
AA seq
DB search
MENSTTTISREELEELQEAFNKIDIDNSGYVSDYELQDLFKEASLPLPGYKVREIVEKIL
AVADNNKDGKISFEEFVSLMQELKSKDISKTFRKIINKREGITAIGGTSSISSEGTQHSY
SEEEKVAFVNWINKALENDADCKHLIPMNPNDGSLFKSLADGILLCKMINLSEPDTIDER
AINKKKLTPFTISENLNLALNSASAIGCTVVNIGAQDLKEGKPHLVLGLLWQIIKVGLFA
DIEISRNEALIALLNEGEDLEELMKLSPEELLLRWVNYHLTNAGWRTISNFSQDIKDSRA
YFHLLDQIAPKGDRDDGPAIAIDLSGFNEENDLKRAEFMLQEADKLGCRQFVTPADVVSG
NPKLNLAFVANLFNTYPSLHKPDNNDIDMNLLEGESKEERTFRNWMNSLGVNPYINHLYS
DLADALVIFQLYEMIRVPVDWSHVNKPPYPALGGNMKKIENCNYAVELGKNKAKFSLVGI
AGQDLNEGNSTLTLALVWQLMRRYTLNVLSDLGEGEKVNDAIIIEWVNQTLKSANKNTFI
SSFKDKSITTSLPVLDLIDAIAPNAVRQEMIKREDLSNEDKLNNAKYAISVARKIGARIY
ALPDDLVEVKPKMVMTVFACLMGKGLNKIK
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaacagcaccaccaccatttctcgggaggagctggaagaactacaagaagcattt
aataaaatagatattgacaacagtgggtatgtcagtgactatgaactccaggacctgttt
aaggaagcaagccttcctctgcctggctacaaggttcgcgaaattgtggagaaaattcta
gcagttgctgacaacaacaaagatgggaaaatcagcttcgaagagtttgtgtcactaatg
caagagttgaaaagcaaagatatcagcaaaacattcagaaaaataattaacaagagagaa
gggattactgctattggaggaacttcatccatttccagtgagggcacacagcattcttat
tcagaggaagaaaaagtggcttttgttaactggataaacaaagccctggagaatgacgct
gactgtaagcatctcatacctatgaatcccaatgacggcagtcttttcaaatcacttgcc
gatggcatccttctttgtaaaatgatcaacttatctgaaccagatacaattgatgaaaga
gccattaataagaagaagctcacccctttcactatttctgaaaatttaaacctagccctg
aattctgcctcagccattggttgtacagtggtcaacattggtgcacaggatctcaaagaa
ggaaaacctcacttggtcttgggacttctctggcagatcatcaaagttggtctttttgct
gatattgagatttccagaaatgaagccctgattgcattgctaaatgaaggtgaggatcta
gaagagttgatgaagctttctccagaggaattactgctgcgttgggtgaactaccatctg
accaatgcaggatggcgtaccatcagcaacttcagccaggacattaaggattcaagagcc
tattttcatctgcttgatcaaattgcacctaaaggtgaccgggatgatggacctgccatt
gccattgacctttcaggatttaatgaggaaaatgacttgaagcgtgctgaattcatgctt
caggaagcagataaactgggctgcagacagtttgttactcctgcagatgtggtttcaggc
aatcctaaacttaatttagcttttgtagctaatctgtttaacacatacccaagcctacac
aagcctgataataatgacatcgatatgaatttattggaaggagaaagcaaggaagagagg
acatttcggaactggatgaattccttgggagtcaacccatacattaatcatttgtacagt
gacctcgcagatgctttagtcatctttcagctctacgaaatgatccgcgtgccagtcgat
tggagccatgtcaacaaacctccgtatcctgctcttggagggaacatgaagaagatcgaa
aactgtaactatgcagtggaacttgggaagaataaggccaaattctccttggttggcatt
gctgggcaggacttaaatgaagggaattccacacttactctggcattggtgtggcagctg
atgagaaggtacacgttgaatgtgttatcggatcttggagagggtgaaaaagtaaatgat
gcaattatcattgaatgggtcaatcagactcttaaaagtgcaaacaaaaatacttttatt
tccagcttcaaggacaaatctattaccactagtttacctgtcttggatttaatagatgcc
attgcaccaaatgcagttcgtcaagaaatgatcaagagagaagacctttctaatgaggac
aagctgaacaatgctaaatacgccatttcagttgctcgaaagatcggtgcccggatatat
gccttacctgatgacctcgtggaagtgaaacccaagatggttatgacagtgtttgcatgc
ttaatgggaaaaggactgaacaaaataaaataa
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