Phocoena sinus (vaquita): 116752916
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Entry
116752916 CDS
T07759
Symbol
RUNX1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04530
Tight junction
psiu04659
Th17 cell differentiation
psiu05200
Pathways in cancer
psiu05202
Transcriptional misregulation in cancer
psiu05220
Chronic myeloid leukemia
psiu05221
Acute myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116752916 (RUNX1)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
116752916 (RUNX1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116752916 (RUNX1)
05202 Transcriptional misregulation in cancer
116752916 (RUNX1)
09162 Cancer: specific types
05221 Acute myeloid leukemia
116752916 (RUNX1)
05220 Chronic myeloid leukemia
116752916 (RUNX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116752916 (RUNX1)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
116752916 (RUNX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
TagH_SH3-like
Motif
Other DBs
NCBI-GeneID:
116752916
NCBI-ProteinID:
XP_032486004
Ensembl:
ENSPSNG00000002463
UniProt:
A0A8C9B130
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All DBs
Position
4:complement(135595562..135845134)
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AA seq
480 aa
AA seq
DB search
MASDSIFESFPSYPQCFMRECVHGMNPSRDVHDASTSRRFTPPSTALSPGKMSEALPLGA
PDAGAALAGKLRSGDRSMVEVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVA
LGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGRSGRGKSFTLTITVF
TNPPQVATYHRAIKITVDGPREPRRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSP
HHPAPTPNPRASLNHSTAFNPQPQSQMQDTRQIQPSPPWSYEQSYQYLGPIASPSVHPAT
PISPGRASGMTTLSAELSSRLSTAPDLTAFGDPRQFSALPSISDPRMHYPGAFTYSPTPV
TSGIGIGMSAMSSATRYHTYLPPPYPGSSQAQGGPFQASSPSYHLYYGASAGSYQFSMVG
GERSPPRILPPCTNASTGSALLNPSLPNQNDVVEAEGSHSNSPTNMAPAARLEEAVWRPY
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagacagcatatttgagtcatttccttcatacccacagtgcttcatgagagaa
tgtgtacatggaatgaatccatctagagacgttcacgatgccagcacgagccgccgcttc
acgccgccttccaccgcgctgagcccgggcaagatgagcgaggcgctgccgctgggcgcc
ccggacgccggcgccgccctggccggcaagctgaggagcggcgaccgcagcatggtggag
gtgctggccgaccacccgggcgagctggtgcgcaccgacagccccaacttcctgtgctct
gtgctgcccacgcactggcgttgcaacaagaccctgcccatcgctttcaaggtggtggca
ctgggggacgttccagatggcactcttgtgactgtgatggcaggcaatgatgaaaactac
tcagccgaactgagaaatgcaacagcggccatgaaaaaccaagtcgcgagattcaatgac
ctcaggtttgtcggtcggagtggaagaggaaagagcttcactctgaccatcaccgtcttc
acaaacccaccacaagtcgccacctaccacagagccatcaaaatcacggtggatggaccc
cgagaacctcgaagacatcgtcagaaactagatgatcagaccaagcccgggagcttgtcc
ttttccgagcggctcagtgaactggagcagctgcggcgcacggccatgagggtcagccca
caccatccggcccctacacccaaccctcgggcctccttgaaccactccactgcctttaac
cctcagcctcagagtcagatgcaggatacaaggcagatccagccgtccccaccatggtcc
tacgagcagtcctaccagtacctgggacccattgcctctccttctgtccacccagcaaca
cccatctcgcctggacgggccagcggcatgacaaccctctctgcagagctttccagtcga
ctctcaaccgcgcccgacctgacagccttcggcgaccctcgccagttttccgcgctgccc
tccatctccgatccccgcatgcactaccccggcgccttcacctactccccgacacccgtc
acgtcgggcatcggcatcggcatgtcggccatgagctcggccacgcgctaccacacgtac
ctgccgccgccctaccctggctcgtcgcaggcgcagggcggcccgttccaggccagctcg
ccgtcctaccacctgtactacggcgcgtcagccggctcctaccagttctccatggtgggc
ggtgagcggtcgccgccgcgcattctgccgccctgcaccaacgcctccacaggctcagcg
ctgctcaaccccagcctcccgaaccagaacgacgtggtggaggccgagggcagccacagc
aactccccaaccaacatggcgcccgccgcgcgcctcgaggaggccgtgtggcgaccctac
tga
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