Phocoena sinus (vaquita): 116752941
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Entry
116752941 CDS
T07759
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03030
DNA replication
psiu03410
Base excision repair
psiu03420
Nucleotide excision repair
psiu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116752941 (RFC4)
03410 Base excision repair
116752941 (RFC4)
03420 Nucleotide excision repair
116752941 (RFC4)
03430 Mismatch repair
116752941 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psiu03032
]
116752941 (RFC4)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116752941 (RFC4)
03400 DNA repair and recombination proteins [BR:
psiu03400
]
116752941 (RFC4)
DNA replication proteins [BR:
psiu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
116752941 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
116752941 (RFC4)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
116752941 (RFC4)
DNA repair and recombination proteins [BR:
psiu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
116752941 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
116752941 (RFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_assoc_2
Rad17
DUF815
AAA_16
AAA_22
AAA_30
AAA_11
AAA_24
Mg_chelatase
AAA_28
RuvB_N
SLFN-g3_helicase
AAA_19
AAA_5
ResIII
DNAX_ATPase_lid
AAA_7
Motif
Other DBs
NCBI-GeneID:
116752941
NCBI-ProteinID:
XP_032486059
Ensembl:
ENSPSNG00000009752
LinkDB
All DBs
Position
4:complement(63839203..63852590)
Genome browser
AA seq
364 aa
AA seq
DB search
MQAFLKGTSISSKPPLTKDRGVAATARSSGENKKAKPVPWVEKYRPKYVDEVAFQEEVVA
VLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVR
EKVKNFAQLTVTGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLIC
NYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIADKEHIKISNEGLAHLVKVSEGDLRK
AITFLQSATRLTGGKEVTEKVITDIAGVIPAETIDGVFAACQSGSFDKLEAVVKDLIDEG
HAATQLVNQLHDGVVENDNLSDKQKSVITEKLAEVDKCLADGADEHLQLIGLCATVMQQL
TQNC
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcatttctaaaaggcacatctatcagcagtaaaccaccattgactaaggatcga
ggagtagctgccactgccagaagtagtggagagaacaagaaagctaaacctgttccgtgg
gtggaaaaatatcgcccaaaatatgtggatgaagttgctttccaggaagaagtggttgca
gtgctaaaaaagtctttagaaggagctgatctccctaatctcttgttttatggcccacct
ggaactggaaaaacatccactattttggcagcagctagggaactctttgggcctgaactt
tttcgattaagagttcttgagttaaatgcatctgatgaacgtggaatacaagtagttaga
gagaaagtgaagaattttgcccaattaactgtgacaggaagccgttcagatgggaagcca
tgtcctccttttaaaattgtgatcctggatgaagcagattctatgacctcagctgctcag
gcagctttaagacgtaccatggagaaagagtctaaaaccacccgattctgtctcatctgt
aactatgtcagtcgaataattgaacctctgacctctagatgttctaagttccgcttcaaa
cctctgtcagataaaattcaacagcagcgattactagacatcgctgataaagaacatatc
aaaattagcaatgagggactagctcatcttgttaaagtgtcagaaggagacttaaggaaa
gccattacatttcttcaaagtgctactcgattaacaggtggaaaggaggtcacagaaaag
gtgatcacagacattgctggggtaataccagctgaaacaattgatggagtatttgctgca
tgtcagagtggctcttttgacaaactagaagctgtggtaaaggacttaatagatgagggt
catgcagcaactcagcttgtaaatcaacttcatgatggggttgtagaaaatgataacctt
tctgataaacagaaatctgtcattacagaaaaactcgctgaagttgataaatgtttagca
gatggtgctgatgaacatctacagctgatcggcctctgcgcaactgtcatgcagcagtta
actcagaattgttaa
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integrated database retrieval system