Phocoena sinus (vaquita): 116753012
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Entry
116753012 CDS
T07759
Symbol
LSS
Name
(RefSeq) lanosterol synthase isoform X1
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00100
Steroid biosynthesis
psiu01100
Metabolic pathways
Module
psiu_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
116753012 (LSS)
Enzymes [BR:
psiu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
116753012 (LSS)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
Motif
Other DBs
NCBI-GeneID:
116753012
NCBI-ProteinID:
XP_032486285
Ensembl:
ENSPSNG00000015377
UniProt:
A0A8C9C7I6
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Position
4:complement(145657006..145699481)
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AA seq
778 aa
AA seq
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MTEGTCLRRRGGPYKTEPATDLSRWRLSNERGRQTWTYFQGEEDPGRGQSGLEAHLLGLD
TKGCVLCTCVSCRQSCFLPELIERSHFKDLPKAHTAREGALNGMTFYAALQAEDGHWAGD
YGGPLFLLPGLLITCYVAHIPLPAGYREEITRYLRSVQLPDGGWGLHIEDKSTVFGTALN
YVSMRILGVGPDDPDLVRARNILHKKGGAVFIPSWGKFWLAVLNVYNWEGLNTLFPEMWL
FPDWMPAHPSTIWCHCRQVYLPMAYCYGIRLSAEEDPLVQSLRQELYVEDYGRIDWPAHR
DSVAPDELYTPHSWLLHVVYAILNLYERHHSAGLRQRAIQKLYEHIAADDRFTKYLSIGP
ISKTINMLACWHREGPASSAFQGHLSRIPDYLWLGLDGMKVQGTNGSQIWDTAFAIQALL
EAGAQHRPEFSSCLQKAHEYLRVSQVPDNLPDYQKYYRQMSKGGFSFSTLDCGWIVADCT
AEALKSLLLLQEKCPFVTKHVPRERLFDAVAVLLSMRNPDGGFATYETKRGGHLLELLNP
SEIFGDIMIDYTYVECTSAVMQALKHFHKQFPDHRAGEIRETLERGLQFCRQKQRPDGSW
EGSWGVCFTYGTYFGLEAFACMGHTYRDGTACAEVSQACDFLLSRQMADGGWGEDFESCE
QRRYVQSARSQIHNTCWALMGLMAVRHPDVAALERGVSYLLGKQLPNGDWPQGLLLLLFL
CASPCLTAALAARPQCTTLPLTARETPGCPPLPPPLPRPLGCSPSGQCPAIIRSLDET
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgacggagggcacgtgtctgcgccgaagagggggaccctataagacagagcccgccacc
gacctcagccgctggcgtctcagcaatgagagggggaggcagacgtggacatacttccaa
ggagaagaagaccctgggcgagggcagtctggcctggaagctcacttactgggcttggac
accaagggatgtgtactgtgcacctgtgtctcgtgtcgccaaagctgtttcctaccggag
ttaatcgagaggagtcactttaaggacttgccgaaagcccacacagcccgtgagggggct
ctcaacgggatgacgttctacgctgcactgcaggctgaggatggccactgggcgggtgat
tatggtggcccgctcttcctcctgccaggcctcctgatcacgtgctatgtggcgcacatt
cctctgccggctggatacagagaagagattacgcggtacctgcggtctgtgcagcttcct
gatggcggctggggcctgcacattgaggataagtccacggtgtttgggactgcgctcaac
tatgtgtctatgagaattctgggtgtggggcctgacgatcctgacctggtgcgagcccgg
aatattcttcacaagaaaggtggtgctgtgttcatcccctcctgggggaagttctggttg
gctgtcctgaacgtgtacaactgggaaggcctcaacactctgttcccagaaatgtggctg
tttcctgactggatgcctgcgcatccctccaccatctggtgccactgccggcaggtgtac
ctgcccatggcctactgctatggcatccggctgagcgctgaggaggacccgctggtccag
agcctccgccaggagctctacgtggaggactacggccgcatcgactggccggcgcacagg
gacagcgtggcccccgatgagctgtacacgccgcacagttggctgctccacgtggtgtat
gcgatcctcaacctgtacgagcgccaccacagcgccggcctgcggcagcgggccatccag
aagctgtatgagcacatcgcagccgatgaccgcttcaccaagtacctcagcatcggcccg
atctcgaaaaccatcaacatgcttgcgtgctggcacagagaggggccggcctcctctgcc
ttccaggggcacttgtccaggattcccgattacctctggctgggcctcgacggcatgaaa
gtgcagggtaccaatggctcgcagatctgggacaccgcgttcgccatccaggctctgctg
gaggcgggtgcacagcacaggccagagttttcgtcctgcctgcagaaggctcatgagtat
ctccgggtctcgcaggtcccagacaacctccccgactaccagaagtactaccgccagatg
agcaagggcggcttctccttcagtacactggactgtggctggattgttgccgactgcaca
gctgaggccttgaagtccctccttctcctgcaggaaaagtgtccctttgtcaccaagcat
gtcccacgagagcggctcttcgatgctgtcgctgtgctgctgagcatgaggaaccctgat
ggagggtttgccacctacgagaccaagcgtgggggacaccttctggagcttctgaacccc
tcggagatcttcggggacatcatgattgactacacatatgtggagtgcacctcggctgtg
atgcaggcgctgaagcatttccacaagcagttcccagaccacagggctggagagatcagg
gagaccctcgagcggggactgcagttctgtcggcagaagcagaggcctgatggctcctgg
gaaggctcctggggggtgtgcttcacctacggcacctactttgggctggaagccttcgcc
tgcatggggcacacttaccgcgatgggactgcctgtgcagaggtctcccaggcctgcgac
ttcctgctgtcccgacagatggcagatggaggctggggggaggacttcgagtcctgtgag
cagcggcgctacgtgcagagcgcccggtcccagatccacaacacgtgctgggccctgatg
gggctgatggccgtcaggcaccctgacgtagcggccctggagagaggagtcagctacctg
cttggaaagcagctgcccaatggcgactggccccagggccttctccttctgctgttcctc
tgtgcctctccctgtctgacggctgccctggctgcgcggccccagtgtaccaccctccct
ctgacagccagagagacgcctgggtgccccccgctcccgccacccctgcccagaccctta
gggtgctctccaagcggtcaatgcccagccattatcagatcactggacgaaacataa
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