Phocoena sinus (vaquita): 116753013
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Entry
116753013 CDS
T07759
Symbol
THRB
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04080
Neuroactive ligand-receptor interaction
psiu04081
Hormone signaling
psiu04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116753013 (THRB)
04081 Hormone signaling
116753013 (THRB)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
116753013 (THRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116753013 (THRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
psiu03310
]
116753013 (THRB)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116753013 (THRB)
Nuclear receptors [BR:
psiu03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
116753013 (THRB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
116753013
NCBI-ProteinID:
XP_032486293
Ensembl:
ENSPSNG00000004059
UniProt:
A0A8C9B6E7
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All DBs
Position
4:2293592..2690517
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AA seq
461 aa
AA seq
DB search
MTPNSMTENGLPAWDKPKPCPHGKQEWKLVGMSEACLHRKSPPERRSALKNEQSPRHLIQ
ATWTSSIFHLDHDDVNNQSVPNAQTFQTEEKKCKGYIPSYLDKDELCVVCGDKATGYHYR
CITCEGCKGFFRRTIQKNLHPSYSCKYEGKCVIDKVTRNQCQECRFKKCIYVGMATDLVL
DDSKRLAKRKLIEENREKRRREELQRSIGHKPEPTDQEWELIKTVTEAHVATNAQGSHWK
QKRKFLPEDIGQAPIVNAPEGGKVDLEAFSHFTKIITPAITRVVDFAKKLPMFCELPCED
QIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSL
SSFNLDDTEVALLQAVLLMSSDRPGLACVERIEKYQDSFLLAFEHYINYRKHHVTHFWPK
LLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgactcccaacagtatgacagaaaatggccttccagcctgggacaagccgaagccttgt
ccccacggcaagcaggagtggaagcttgtgggaatgtctgaagcctgcctgcacaggaag
agccccccagagaggcgcagcgcattgaagaatgaacagtcgccccggcatctcatccag
gccacctggaccagctccatattccatctggaccacgacgatgtgaacaatcagagcgtc
cctaacgcccagaccttccaaacggaagagaagaaatgtaaaggctacatccccagttac
ttagacaaggacgagctatgtgtcgtgtgtggtgacaaagccaccggctaccactaccgc
tgcatcacgtgtgaaggctgcaagggtttctttagaagaaccattcagaaaaatctccat
ccatcctattcctgtaaatatgaaggaaaatgtgtcatagacaaagttacaagaaatcag
tgccaggaatgtcgctttaaaaaatgcatctacgttggcatggcaacagatttggtcctg
gacgacagcaagcgtctggccaagaggaagctgatcgaggagaaccgggagaaaaggcgg
cgggaggagctgcagagatccatcggtcacaagcccgagcccaccgaccaggagtgggag
ctcatcaagaccgtcaccgaggcccacgtggccaccaacgcccaaggcagccactggaag
cagaagcggaagttcctgccagaagacattggacaagcgccaatagtaaacgccccagaa
ggtggaaaggtcgacttggaagccttcagccattttacaaaaatcatcacaccagcaatt
accagagtggtggattttgccaaaaagttgcctatgttttgtgagctgccatgcgaagac
cagataatcctcctcaaaggctgctgcatggagatcatgtcccttcgcgctgctgtgcgc
tacgacccagaaagtgagactttaaccttgaacggggagatggcggtgactcggggccag
ctcaaaaacgggggtctcggggtggtgtccgacgccatcttcgacctgggcatgtcgctg
tcttctttcaacctggatgacactgaagtcgcgctccttcaggccgtcctgctgatgtct
tcagaccgcccagggcttgcctgtgttgagagaatagaaaaataccaagatagtttcctg
ctggcctttgaacactatatcaattaccggaaacaccacgtgactcacttttggccaaaa
ctcctgatgaaggtgacagatctgcggatgattggagcctgccatgccagccgcttcctg
cacatgaaggtggaatgccccacagaactctttcccccattgttcttggaagtgtttgag
gattag
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