Phocoena sinus (vaquita): 116753014
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Entry
116753014 CDS
T07759
Symbol
GABPA
Name
(RefSeq) GA-binding protein alpha chain
KO
K09441
GA-binding protein transcription factor, alpha
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116753014 (GABPA)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
116753014 (GABPA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ets
GABP-alpha
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
116753014
NCBI-ProteinID:
XP_032486301
Ensembl:
ENSPSNG00000014275
UniProt:
A0A8C9CB95
LinkDB
All DBs
Position
4:126791638..126837475
Genome browser
AA seq
454 aa
AA seq
DB search
MTKREAEELIEIEIDGTEKPECTEESIVEQTYTPAECVSQAIDINEPIGNLKKLLEPRLQ
CSLDAHEICLQDIQLDPERSLFDQGVKTDGTVQLSVQVISYQGIEPKLNILEIVKPAETV
EVVIDPDAHHAEAEAHLVEEAQVITLDGTKHITTISDETSEQVTRWAAALEGYRKEQERL
GIPYDPIQWSTDQVLHWVVWVMKEFSMTDIDLTTLNISGRELCSLNQEDFFQRVPRGEIL
WSHLELLRKYVLASQEQQMNEIVTIDQPVQIIPASVQSATPTAIKAINSSAKAAKVQRAP
RISGEDRSSPGNRTGNNGQIQLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKW
GQRKNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIGYSAAELNRLVTE
CEQKKLAKMQLHGIAQPVTAVALATASLQTEKDN
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaagagaagcagaggagctgatagaaattgagattgatggaacagagaaacca
gagtgcacagaagaaagcattgttgaacaaacctacactccagctgaatgtgtaagccag
gccatagacatcaatgagccaataggcaatttaaagaaactactagaaccaagactgcag
tgttctttggatgctcatgaaatttgcctgcaagatatccagctggatccagaacgaagt
ttatttgaccaaggagtaaagacagatggaactgtacagcttagtgtacaggtaatttct
taccaaggaattgaaccaaagctaaacatcctggaaattgttaaacctgcggaaacagtt
gaagtagttattgatccagatgcccaccatgccgaagcagaagcacatcttgttgaggaa
gctcaagtgataactcttgatggcacaaaacacattacaaccatttcagatgaaacctca
gaacaagtgacgagatgggctgctgctctggaaggttataggaaagagcaagaacgtctt
gggataccctatgatcccatacagtggtccacagaccaagtcctgcattgggtggtttgg
gtaatgaaggaattcagcatgaccgatatagacctcactacgctgaatatttccggaaga
gaactctgtagtctcaaccaagaagatttttttcagcgggttcctcggggagaaattctg
tggagtcatctggaacttcttcgaaaatatgtattggcaagccaagaacaacagatgaat
gagatagttacaattgatcaacctgtgcaaattattccagcatcagtgcagtctgctaca
ccaacagccattaaagctataaatagtagtgcaaaggcagctaaagtacaaagagctcca
aggatttcaggagaagatagaagttcacctgggaacagaacaggaaacaatggccaaatc
caactgtggcagtttttgctagaacttcttactgacaaggatgctcgagactgcatttct
tgggttggtgatgaaggagaatttaagctaaatcagcccgaactggttgcacaaaaatgg
ggacaacgtaaaaataaacctacaatgaattatgagaaacttagtcgtgcattaaggtat
tattatgatggggacatgatttgtaaagttcaaggcaagagatttgtatacaagtttgtc
tgtgacttgaagactcttattggatacagtgcagcagagttgaaccgtttggtcacagaa
tgtgaacagaagaaacttgcaaagatgcaactccatggaattgcccagccagtcacagca
gtagccctggctactgcatctctgcaaacagaaaaggataattga
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