Phocoena sinus (vaquita): 116753039
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Entry
116753039 CDS
T07759
Symbol
TBC1D5
Name
(RefSeq) TBC1 domain family member 5
KO
K18469
TBC1 domain family member 5
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116753039 (TBC1D5)
Membrane trafficking [BR:
psiu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
116753039 (TBC1D5)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3452
Motif
Other DBs
NCBI-GeneID:
116753039
NCBI-ProteinID:
XP_032486355
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All DBs
Position
4:8800040..9348233
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AA seq
788 aa
AA seq
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MYHSLSETRHPLQPEEQEVGIDPLLSYSHKPGGDSNQNGRRTSSALDSDGTFNSYRKEWE
ELFVNNNYLAAVRQKGIHGQLRSSRFRSICWKLFLCVLPQDKSQWINRIKELRAWYSNIK
EIHITNPRKVVGQQDLMINNPLSQDEGSLWNKFFQDKELRSVIEQDVKRTFPEMQFFQQE
NVRKILTDVLFCYARENEQLLYKQGMHELLAPMVFTLHCDHQAFLHASESAQPSEEMKTL
LNPEYLEHDAYAMFSQLMETAEPWFSTFEHDGQKGKETLMTPIPFARPQDLGPTVAIVTK
VNQIQDHLLKKHDIELYMHLNRLEIAPQIYGLRWVRLLFGREFPLQDLLVVWDALFADGL
SLSLVDYIFIAMLLYIRDALISSNYQTCLGLLMHYPLIGDVHSLILKALFLRDPKRNPRP
VTYQFHPNLDYYKARGADLMNKSRTSAKGAPLNINKVSTSLMNFGRKLISPATAPGGVDS
PVPGGSGGASSPAVVPTRTLAEAPTHPLQQQQRLMKSESMPVQLNKGQSSKNIRSSPSIE
SLPGGREFTGSPPSSATKKDSFFSNISRSRSHSKTMGRKESEEELEAQISLLQGQLNDLD
AMCKYCAKVMDTHLVNIQEVILQENLEKEDQILVSLAGLKQIKDILKGSLRFNQSQLEAE
ENEQITISDDHYCSSGQGHLPRATKQAPSAAPPVRREKGDMDDFILVSKDDEGGSARAAP
VGQAQAPRPLRSSARRAPVFSDPLTGPAAASASASASSGSPSSSPSPDDDSSGNSKDSGF
TIVSPLDL
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgtatcattccttatctgaaactagacatcctctgcagccagaagaacaagaagtgggc
attgaccccttgttgagttactcacacaagcctggaggagattcaaatcaaaatggaaga
agaacaagttctgctttagactctgatggaacttttaattcctataggaaagaatgggaa
gaactatttgtaaacaacaattacttggcagcagtgaggcagaaggggattcatgggcag
ctgagaagcagcaggttccgcagcatttgctggaagctctttctttgtgttcttcctcaa
gataaaagtcagtggataaatagaattaaagaattaagagcatggtatagcaacattaaa
gaaattcacatcacaaacccgaggaaggttgttggccagcaagacttgatgatcaacaat
cccctttcccaggatgaagggagtctttggaacaaattcttccaggataaagaacttcgg
tcagtgattgaacaagatgtcaaaagaacgtttcctgaaatgcagtttttccaacaagaa
aatgtgagaaaaattcttacagatgttcttttctgttatgctagagaaaacgagcagttg
ctttataagcagggcatgcacgagctgttggctccaatggtcttcaccctccactgtgac
caccaagcctttcttcatgccagtgagtctgcacagccaagtgaggaaatgaaaactctc
ttgaaccctgagtatctggaacatgatgcctatgcaatgttctcacaacttatggaaact
gctgaaccttggttttctacttttgagcatgatggtcaaaaggggaaagaaaccctgatg
actcctatcccctttgctagaccacaggatttggggccaacagttgctattgttactaaa
gtcaaccagatccaggatcatctactaaagaagcatgatattgagctttacatgcacctg
aacagactagaaattgcaccacagatatatgggttacggtgggtacggctgctgtttgga
cgagagttccccctgcaggatcttctggtggtctgggatgccctgtttgcagatggcctt
agcctgagtttggttgattatatcttcatagccatgttactctacatccgagatgctttg
atctctagtaactaccagacctgtcttggccttctgatgcattacccactcatcggggat
gttcactcgctgattcttaaggctctgttccttcgcgatcccaagagaaatccaagacca
gtgacttatcagttccatccaaatttagattattacaaagcccgaggagcagacctcatg
aataaaagccggactagtgccaaaggtgctcccctgaatatcaataaagtctctaccagc
ctgatgaactttggaagaaagttgatttctccggcaacggccccgggcggtgtggatagc
ccagtaccgggaggcagtggcggtgcctcctccccggctgtggttcccaccaggaccctg
gcagaggcccccacgcatcctctgcagcagcagcagaggctgatgaaatcggaaagcatg
ccagtgcagctgaacaaaggacaaagctctaaaaacatccgttcatctccaagcattgag
agtttgcctggaggaagagagttcactggctccccaccttcatctgctactaaaaaggat
tcctttttcagcaacatctcccgttcacgctcacacagcaaaactatgggcagaaaagaa
tctgaagaagaattagaagcccagatttccctccttcaaggacagttgaatgacctggat
gccatgtgcaaatactgtgcgaaggtgatggacactcatcttgtaaatattcaagaagtg
atactacaagaaaatttggaaaaagaagatcaaattctggtttccctggcaggactaaag
cagatcaaagacattctaaaaggttccctgcgtttcaaccagagccagctggaagccgag
gagaacgagcagatcaccatctccgacgaccactactgctccagcggccagggtcacctg
cccagggccaccaagcaggccccttcagcagcgccgccggtgcgcagggagaaaggcgac
atggacgacttcatcctcgtctccaaagacgacgaagggggcagcgccagggcggccccg
gtcggccaggctcaggccccgcggcccctccggagctcggcccggcgcgccccggtgttc
tcagacccgctgaccggcccggccgcggcctcggcctcggcctcggcctcgtccggcagc
cccagctccagccccagccccgacgacgacagcagcggcaacagcaaggactcgggcttc
accatcgtgagccccctggacctctga
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