KEGG   Phocoena sinus (vaquita): 116753065
Entry
116753065         CDS       T07759                                 
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
  KO
K16796  transcription factor SOX2 (SOX group B)
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu04390  Hippo signaling pathway
psiu04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04390 Hippo signaling pathway
    116753065 (SOX2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    116753065 (SOX2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:psiu03000]
    116753065 (SOX2)
Transcription factors [BR:psiu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    116753065 (SOX2)
SSDB
Motif
Pfam: SOXp HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 116753065
NCBI-ProteinID: XP_032486414
Ensembl: ENSPSNG00000001850
UniProt: A0A8C9B6R2
LinkDB
Position
4:59130201..59131687
AA seq 328 aa
MYNMMETELKPPGPQQTSGGGGGGGGGGGGGGGNNSTAAAAGGNQKNSPDRVKRPMNAFM
VWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYK
YRPRRKTKTLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNG
SYSMMQDQLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQ
QGTPGMALGSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAP
SRLHMSQHYQSGPVPGTAINGTLPLSHM
NT seq 987 nt   +upstreamnt  +downstreamnt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggcggcggcggcggcggcggcggcggcaacaactccaccgcggcggcg
gcgggcggcaaccagaagaacagcccggaccgcgtcaagcggcccatgaacgccttcatg
gtgtggtcccgcgggcagcggcgcaagatggcccaagaaaaccccaagatgcacaactcg
gagatcagcaagcgcctgggcgccgagtggaaacttttgtcggagacggagaagcggccg
ttcatcgacgaggccaagcggctgcgagcgctgcacatgaaggaacacccggattataaa
taccggccccggcggaaaaccaagacgctcatgaagaaggataagtacacgctgccggga
gggctgctcgccccgggcggcaacagcatggcgagcggagtcggggtgggcgccggcctc
ggcgcgggcgtgaaccagcgcatggacagctacgcgcacatgaacggctggagcaacggc
agctacagcatgatgcaggaccagctgggctacccgcagcacccgggcctcaacgcgcac
ggcgccgctcagatgcagcccatgcaccgctacgacgtgagcgccctgcagtacaactcc
atgaccagctcgcagacctacatgaacggctcgccgacctacagcatgtcctattcgcag
cagggcacccctggcatggctcttggctccatgggctcggtggtcaagtccgaggccagc
tccagcccccccgtggttacctcttcttcccactccagggcgccctgccaggccggggac
ctccgggacatgatcagcatgtacctccccggcgccgaggtgccggagcccgccgccccc
agcagacttcacatgtcgcagcactaccagagcggcccggtgcccggcacggccattaac
ggcacactgcccctctcgcacatgtga

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