Phocoena sinus (vaquita): 116753097
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Entry
116753097 CDS
T07759
Symbol
GTF2E1
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03022
Basal transcription factors
psiu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116753097 (GTF2E1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
116753097 (GTF2E1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psiu03021
]
116753097 (GTF2E1)
Transcription machinery [BR:
psiu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
116753097 (GTF2E1)
Prokaryotic type
Archaeal type
TFE
116753097 (GTF2E1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Zf-C2H2_ZNF451_C
Cas12f1-like_TNB
DUF7385
zf-H2C2_2
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-GeneID:
116753097
NCBI-ProteinID:
XP_032486493
Ensembl:
ENSPSNG00000011986
LinkDB
All DBs
Position
4:complement(78114020..78150039)
Genome browser
AA seq
438 aa
AA seq
DB search
MADPDVLTEXPAALKRLAKYVIRGFYGIEHALALDILIRNPCVKEEDMLELLKFDRKQLR
SVLNNLKGDKFIKCRMRVETAADGKTTRHNYYFINYRTLVNVVKYKLDHMRRRIETDERD
STNRASFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVEEDESAMPKKDARTLLARF
NEQIEPIYALLRETEDVNLAYEILEPEPTEIPALKQSKDRAATAAAAAGLAGGHHREAWA
TKGPSYEDLYTQNVVINMDDQEDLHRASLEGKSAKERPIWLRESTVQGAYSSEEMKEGGL
DIDSFQEREEGRAGPDDNEEVMRALLIHEKKTPSATAGSVGAAAPVTTANGSDSESETSE
SDDDSPPCATAVAAHHGEEDEEDDEFEEVADDPIVMVAGRPFSYSEVSQKPELVAQMTTD
EKEAYIAMGQRMFEDLFE
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccagatgtcctcaccgagngtcctgcagccttgaagcggttagccaagtat
gtgatccgggggttttatggcattgagcatgctttggccttggacatcttgatccgaaac
ccctgtgtgaaagaggaggacatgctggagctgctcaaatttgatcggaagcaacttcga
tcagtcttgaataatttaaagggagacaaattcatcaagtgcagaatgagggtagagact
gctgcagatgggaaaaccactcgccacaactactactttatcaattatcgtactcttgtt
aatgtggtaaaatataaattggaccacatgagaaggaggattgaaactgatgagagagat
tccaccaaccgggcttccttcaaatgtcccgtctgtagtagtacttttacagatttagaa
gctaatcagctctttgatcccatgacaggaactttccgctgtactttttgccatacagag
gtagaagaagatgaatcagcaatgcccaaaaaagatgcacgcacacttttggcaaggttt
aatgaacaaattgagcccatttatgctttgcttcgagagacagaggatgtgaacttggcc
tatgaaatacttgagccagaacccacagaaataccagccctgaaacagagcaaggaccgt
gcagcaactgctgctgcagctgctggcctagcaggtgggcaccaccgggaagcatgggcc
accaagggtccctcttatgaggacttatacactcagaatgttgtcattaatatggatgac
caagaagatcttcatcgagcctcactggaagggaaatctgccaaagagagacctatttgg
ttaagagagagcactgtccaaggagcatatagttctgaagagatgaaggaaggtggctta
gatatagactcgtttcaggagcgtgaggaaggccgtgcgggaccagatgataatgaggag
gtcatgcgagcactgctcattcatgagaagaagaccccctctgccacagcaggctcagtg
ggggcggctgctcctgtgaccactgccaatggcagtgactctgagagtgagaccagtgag
tcagacgatgactctccaccctgtgctacagctgtggctgcacatcatggggaagaggat
gaggaagatgatgaatttgaggaagtagcagatgaccccattgtcatggtggctggccgt
ccgttctcctacagcgaagtgagccagaagccagagctggtggcccaaatgacaacagat
gaaaaggaagcgtacatagcaatgggacaacgcatgtttgaggacctctttgagtga
DBGET
integrated database retrieval system
