Phocoena sinus (vaquita): 116753199
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Entry
116753199 CDS
T07759
Symbol
U2AF1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116753199 (U2AF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psiu03041
]
116753199 (U2AF1)
Spliceosome [BR:
psiu03041
]
Complex A
U2 snRNP components
U2 related factors
116753199 (U2AF1)
Complex B
116753199 (U2AF1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
116753199
NCBI-ProteinID:
XP_032486628
Ensembl:
ENSPSNG00000010054
UniProt:
A0A8C9E2V6
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Position
4:complement(143259697..143272649)
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AA seq
237 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSSQ
SADGLRCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGGRERDRRRSRDRERSGRF
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtatttggcctccatcttcggcaccgagaaagacaaagtcaactgttcattt
tatttcaaaattggagcatgtcgtcatggagacagatgctctcggttgcacaataaacca
acctttagccagaccattgccctcttgaacatttaccgtaaccctcaaaactcttcccag
tctgctgacggtttgcgctgtgctgtgagcgatgtcgagatgcaggaacactatgatgaa
ttttttgaggaggttttcacagaaatggaggagaagtacggggaggtggaggagatgaac
gtctgcgacaacctcggagaccacctcgttgggaacgtgtatgtcaagtttcgccgtgaa
gaagatgcggaaaaggccgtgattgacctgaacaaccgctggtttaacggccagccgatc
cacgccgagctctcccctgtgaccgacttcagagaagcctgctgccgccagtacgagatg
ggggagtgcacgcggggaggcttctgcaacttcatgcatctgaagcccatctctcgggag
ctgcggcgggagttgtacgggcgccgccgtaagaagcataggtcgcggtcccgctctcgg
gagcgtcgctctcggtctagagaccgtggccgcggcggcggcggtggtggcggcggggga
cgggaacgcgacaggaggcggtcgagagaccgagagaggtctggacgattctga
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