Phocoena sinus (vaquita): 116753235
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Entry
116753235 CDS
T07759
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor A protein 1-like
KO
K03145
transcription elongation factor S-II
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psiu03021
]
116753235
Transcription machinery [BR:
psiu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
116753235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Med26
Zn_ribbon_TFIIS
HVO_0758
Motif
Other DBs
NCBI-GeneID:
116753235
NCBI-ProteinID:
XP_032486682
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Position
4:111539730..111541060
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AA seq
299 aa
AA seq
DB search
MEDEVVRIAKKMDKMVXNKNATGALDLLRELKTFPMTLELLQSTRIGMSVNAICKQSTDE
EVTSLAKSLIKSWKKLLDGPSTDKDSEEKKKDTAVTSQNSPEAREECSSSSNVSGRKDET
NTRDTYVSSFPRAPSASDSVRLKCWEMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEI
RNTNMKYKNRIRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNL
TKESIREHQMAKTGGPQMDLFTCGKCKKYCTYTQVQMQSVDEPMTTFVVCNECGNRWKF
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaggtggttcgcattgccaagaagatggacaagatggtgtagaataagaac
gcgactggagcactggatttactgagggagcttaagacttttcccatgaccttggaatta
ttacagtccacaagaatcggaatgtcagtgaatgctatttgcaagcagagcacagatgaa
gaagttacatctttagcaaagtccctcatcaaatcctggaaaaagttattagatggacca
tcaacagataaagactctgaagaaaagaaaaaagatactgcagttacatcacagaatagc
cctgaagcaagagaggaatgtagctccagtagcaatgtaagtggcagaaaggatgagaca
aatacccgagacacttacgtttcatcttttcctcgggcaccaagcgcttctgattctgtg
cggttaaagtgttgggagatgctcgctgcggctctccgaacgggagatgactacatcgct
attggagctgatgaggaagaattaggatctcaaatcgaggaagctatctatcaagaaata
aggaatacaaacatgaaatacaaaaatagaatacgaagtaggatatcaaatcttaaggat
gctaagaatccaaatttaaggaaaaatgtgctgtgtgggaatattcctcctgacttattt
gctagaatgacggcagaggagatggccagcgatgagctcaaagagatgcggaaaaacttg
accaaagaatccatcagagagcatcagatggccaagacaggtggaccccagatggacttg
ttcacatgtggcaaatgcaagaagtactgcacttacacacaggtccaaatgcagagtgtt
gatgaaccaatgacaacgtttgttgtctgcaacgagtgtggaaaccggtggaagttctga
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