Phocoena sinus (vaquita): 116753355
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Entry
116753355 CDS
T07759
Symbol
IFT57
Name
(RefSeq) intraflagellar transport protein 57 homolog
KO
K04638
intraflagellar transport protein 57
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu05016
Huntington disease
psiu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
116753355 (IFT57)
05022 Pathways of neurodegeneration - multiple diseases
116753355 (IFT57)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psiu03037
]
116753355 (IFT57)
Cilium and associated proteins [BR:
psiu03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
116753355 (IFT57)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT57
MCPsignal
Mod_r
DUF745
VASP_tetra
Motif
Other DBs
NCBI-GeneID:
116753355
NCBI-ProteinID:
XP_032486938
Ensembl:
ENSPSNG00000001641
UniProt:
A0A8C9DX90
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Position
4:89703431..89764346
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AA seq
427 aa
AA seq
DB search
MAAAVVTPSGLEDGVSRSRGEGAGEVVVERGPGAAYHMFVVMEDLVEKLKLLRYEEDLLR
KNNLKPPSRHYFALPTNPGEQFYMFFTLAAWLINKAGRPFEQPQEYDDPNATISNILSEL
RSFGRTADFPPSKLKSGYGAHVCYVLDCLAEEALKYTGFTWKRPTYPVEELEEETVAEDD
AELTLNKVDEEFVEEETDNEENFIDLSVLKAQTYRLDMNESAKQEDILESTTDAAEWSLE
VERVLPQLKVTIRTDNKDWRIHVDQMHQHKSGIESALKETKGLLDKLHSEISRTLEKIGS
REKYINNQLEHLVQEYRAAQAQLSEARERYQQGNGGVTERTRLLSEVTEELEKVKQEMEE
KGSSMTDGAPLVKIKQSLTKLKQETIQMDIRIGVVEHTLLQSKLKEKSNMTRDMHATVIP
ESAIGSY
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcagtggtcacgccgtcgggtttggaggatggggtttctcggtcccgcggc
gaaggggcaggggaggtggtcgtggaacggggccccggcgcggcctaccacatgttcgtg
gtgatggaggacctggtggagaagctgaagttgctccgctatgaggaggatctcctccgg
aaaaacaacctgaagcccccgtccagacactattttgcactgcctaccaatcctggggaa
cagttctacatgtttttcactcttgctgcttggttgattaataaagcaggacgccccttt
gagcagcctcaagaatatgatgaccctaatgcaacaatctctaacatattatctgaactt
cgatcattcggtagaactgcagattttcctccttcaaaattaaaatcgggttatggagca
catgtatgctatgttcttgactgtttagccgaagaagcattaaaatatactggtttcact
tggaaaagaccaacatacccagtggaagaattagaagaagaaactgttgcagaagatgat
gcagaattaacattaaataaagtggatgaagaatttgtggaagaggagacagacaatgaa
gaaaactttattgatctcagcgttttgaaggcccagacctatcgcttggatatgaacgag
tctgccaaacaagaagatattttggaatccacaacagatgctgcggaatggagtctagaa
gtggaacgtgtactaccacaactgaaagtcacgatcaggactgacaataaggattggaga
atccatgttgaccaaatgcaccagcacaaaagtggaattgaatctgctctaaaggagacc
aagggacttttggacaaacttcacagtgaaattagcaggactctagagaagattggcagc
cgagaaaagtacatcaacaatcagcttgagcacttggttcaggaatatcgtgcagctcaa
gcccagctgagtgaggcaagggagcgttaccagcagggaaatggtggagtaactgaaagg
accagactcctgtctgaggttacagaagagctagaaaaggtaaaacaagaaatggaagaa
aaaggcagcagtatgactgatggtgctcctttggtgaagattaaacagagcttaacgaag
ctgaagcaagaaactattcagatggacattagaatcggtgttgtggaacacacattactc
cagtcaaaattgaaggagaagtccaacatgaccagggacatgcatgccacagtcattcca
gaatctgcaataggctcttattaa
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