Phocoena sinus (vaquita): 116753378
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Entry
116753378 CDS
T07759
Symbol
CLDN1
Name
(RefSeq) claudin-1
KO
K06087
claudin
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03272
Virion - Hepatitis viruses
psiu04382
Cornified envelope formation
psiu04514
Cell adhesion molecule (CAM) interaction
psiu04530
Tight junction
psiu04670
Leukocyte transendothelial migration
psiu05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
116753378 (CLDN1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116753378 (CLDN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116753378 (CLDN1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
116753378 (CLDN1)
09158 Development and regeneration
04382 Cornified envelope formation
116753378 (CLDN1)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
116753378 (CLDN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psiu03037
]
116753378 (CLDN1)
04147 Exosome [BR:
psiu04147
]
116753378 (CLDN1)
Cilium and associated proteins [BR:
psiu03037
]
Other cilia and associated proteins
Stereociliary proteins
116753378 (CLDN1)
Exosome [BR:
psiu04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
116753378 (CLDN1)
Exosomal proteins of colorectal cancer cells
116753378 (CLDN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Voltage_CLC
SUR7
DUF7937
DUF6336
Cytochrom_B_C
DUF2207_C
Amastin
DUF6479
HAAS_TM
Motif
Other DBs
NCBI-GeneID:
116753378
NCBI-ProteinID:
XP_032486980
Ensembl:
ENSPSNG00000012587
UniProt:
A0A8C9E3N9
LinkDB
All DBs
Position
4:complement(66963462..66979452)
Genome browser
AA seq
211 aa
AA seq
DB search
MANAGLQLLGFILAFLGWIGSIVSTALPQWRIYSYAGDNIVTAQAIYEGLWMSCVSQSTG
QIQCKIFDSLLNLNSTLQATRALMVIGILLGLVAVFVATVGMKCMKCLEDNEAQKMRMAV
IGGVIFLISGLAILVATAWYGNRIVQEFYDPMTPVNARYEFGQALFTGWAAASLCLLGGA
LLCCSCPQKTTSYPTPRPYPKPAPSSGKDYV
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgcggggctgcagctgctgggcttcatcctggctttcctgggctggattggc
tccatcgtcagcacggcgctgccccagtggaggatttactcctacgctggcgacaacatc
gtgacggcccaggccatctacgaggggctgtggatgtcctgcgtgtcgcagagcaccggg
cagatccagtgcaaaatcttcgactccttgctgaatctgaacagcactctgcaagcaacc
cgtgccttgatggtgattggcatcctgctgggactagtagccgtctttgtggccactgtc
ggcatgaagtgtatgaagtgcctggaagacaacgaggcacagaagatgcggatggctgtc
attgggggcgtgatctttcttatttcaggtctggctattttagttgccacagcatggtat
ggcaatagaattgttcaagaattctatgaccccatgaccccggtcaatgccaggtatgaa
tttggtcaggctctcttcactggctgggctgctgcttccctctgccttctgggaggtgcc
ctactttgctgctcctgtccccagaaaacaacatcgtacccaacaccaaggccctatcca
aaacctgcaccttccagtgggaaggactacgtgtga
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