Phocoena sinus (vaquita): 116753408
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Entry
116753408 CDS
T07759
Symbol
HMGCL
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu00280
Valine, leucine and isoleucine degradation
psiu00650
Butanoate metabolism
psiu01100
Metabolic pathways
psiu04146
Peroxisome
Module
psiu_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
116753408 (HMGCL)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
116753408 (HMGCL)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
116753408 (HMGCL)
Enzymes [BR:
psiu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
116753408 (HMGCL)
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GFIT
Motif
Pfam:
HMGL-like
PRA-PH
Motif
Other DBs
NCBI-GeneID:
116753408
NCBI-ProteinID:
XP_032487049
Ensembl:
ENSPSNG00000000674
UniProt:
A0A8C9ATU2
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Position
1:complement(18628386..18645678)
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AA seq
325 aa
AA seq
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MATVKKALMWRLVGSASLRAVSTSSVGTFPKQVKIVEVGPRDGLQNEKNIVPTPMKIKLI
DMLSEAGLPVIEATSFVSPKWVPQMADHAEVMKGIQKFPGISYPVLTPNFKGFQAAVAAG
AKEVAVFGAASELFSKKNINCSIDESVQRFDEILKAARAASIPVRGYVSCVLGCPYEGKI
SPAKVAEVAKKMYSVGCYEISLGDTIGVGTPGTMKDMLSAVMHEVPVAALAVHCHDTYGQ
ALANTLMALQMGVSVVDSSVAGLGGCPYAHGASGNLATEDLVYMLAGLGVHTGVNLQKLL
EAGAFICQALNRRTSSKVAQATCKL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagtgaagaaggcgctcatgtggagactggtgggctcggcgtccctccgggct
gttagcacctcatctgtgggtactttcccaaagcaagtgaaaattgtggaggttggtccc
cgagacggactacaaaatgaaaagaatattgtacctactccaatgaaaatcaaactgata
gacatgctttccgaagcaggactccctgttatagaagccaccagctttgtgtctcccaaa
tgggttccccagatggctgaccacgctgaagtcatgaagggcatccagaaatttcccggc
atcagctacccagtgctgaccccaaatttcaaaggcttccaggcagcggttgctgccgga
gccaaggaagtggctgtctttggagctgcctccgagctcttcagcaagaagaacatcaac
tgctccatagatgagagcgtgcagcggtttgacgaaatcttgaaggcagctcgggcagcc
agtatccctgtgcgggggtacgtctcctgtgtgctcgggtgcccctacgaagggaagatc
tcgccggctaaagtagctgaggttgccaagaagatgtactcagtgggctgctatgagatc
tctctgggagacaccattggcgtgggcacccctgggaccatgaaggatatgctgtccgct
gtcatgcatgaggtgccagtggctgccctggctgtccactgccatgacacctatggccag
gccctggccaacaccttgatggccctgcagatgggagtgagtgtcgtggactcttctgtg
gcgggactcggaggctgtccctatgcacacggagcatcgggaaacttggccaccgaggac
ctggtctacatgctggccggcttgggcgttcacacgggtgtgaacctccagaagctcctg
gaagctggggcctttatctgtcaagccctgaacagaagaaccagctccaaagtggctcag
gctacctgtaaactgtga
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