Phocoena sinus (vaquita): 116753432
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Entry
116753432 CDS
T07759
Symbol
CLDN16
Name
(RefSeq) LOW QUALITY PROTEIN: claudin-16
KO
K06087
claudin
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03272
Virion - Hepatitis viruses
psiu04382
Cornified envelope formation
psiu04514
Cell adhesion molecule (CAM) interaction
psiu04530
Tight junction
psiu04670
Leukocyte transendothelial migration
psiu05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
116753432 (CLDN16)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116753432 (CLDN16)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116753432 (CLDN16)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
116753432 (CLDN16)
09158 Development and regeneration
04382 Cornified envelope formation
116753432 (CLDN16)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
116753432 (CLDN16)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psiu03037
]
116753432 (CLDN16)
04147 Exosome [BR:
psiu04147
]
116753432 (CLDN16)
Cilium and associated proteins [BR:
psiu03037
]
Other cilia and associated proteins
Stereociliary proteins
116753432 (CLDN16)
Exosome [BR:
psiu04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
116753432 (CLDN16)
Exosomal proteins of colorectal cancer cells
116753432 (CLDN16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
DUF1118
Motif
Other DBs
NCBI-GeneID:
116753432
NCBI-ProteinID:
XP_032487085
Ensembl:
ENSPSNG00000012645
LinkDB
All DBs
Position
4:67044189..67067257
Genome browser
AA seq
307 aa
AA seq
DB search
MTSRTPLWVTACLYYSYRSLRRLQWGVRKRKRPAFSHPQVPEAQKTDSIPATCVGPRLAA
AHVSLADRLFVKMRDLFQYVACFFAFFSTGFLVVATWTDCWMVNADDSLEVSTKCRGLWW
ECVTNAFDGIRTCDEYDSILAEHPLKLVVTRALMITADVLAGFGFIILLLGLDCVKFLPD
EPYIKVRICFVAGATLLIAGAPGIIGSVWYAVDVYVERSSLVLHNIFLGIQYKFGWSCWL
GMAGSLGCFLAGAVLTCCLYLFKDVGPERNYPYSRRKGYSTTAVSTAQSYAAPRTQTAKM
YAVDTRV
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaggacccctctgtgggttacagcctgtttgtattactcttaccgcagctta
agacgcctgcagtggggagtaaggaaaaggaaaagaccagcattttcacatccccaggta
ccagaagcacagaagactgacagcattccagctacctgcgtgggtccaaggctggcagct
gcccatgtgtcccttgcagacaggctgttcgttaagatgagggatctttttcagtatgtc
gcctgcttctttgcatttttctctactgggttcttggttgtggccacctggacagactgt
tggatggtgaatgcagatgactccctggaggtgagcacaaaatgccgaggcctctggtgg
gagtgtgtcacaaatgcttttgatgggattcgcacctgtgatgagtacgattctatactt
gctgaacaccccttgaagctggtggtaactcgggcgctgatgattactgcagatgtttta
gctggatttggatttattatcctgctccttggtcttgactgtgtgaaattcctccctgac
gagccatacatcaaagtccgcatctgctttgttgctggagccacattacttatagcaggt
gccccgggaatcattggctctgtgtggtatgctgttgatgtttatgtggaacgttcttct
ctggttttgcacaatatatttcttggcatccaatataaatttggttggtcctgttggctt
ggaatggctgggtctctgggttgcttcttggctggtgctgtcctcacatgctgcttatac
ctcttcaaagatgttggacctgagaggaactatccttattccaggaggaaaggctattca
actacagctgtttccacggcccagtcatatgcagcccctcggacacagactgccaaaatg
tatgctgtagacactagggtgtga
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