KEGG   Phocoena sinus (vaquita): 116753554
Entry
116753554         CDS       T07759                                 
Symbol
PLOD1
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 isoform X1
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu00310  Lysine degradation
psiu01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    116753554 (PLOD1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psiu04147]
    116753554 (PLOD1)
Enzymes [BR:psiu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     116753554 (PLOD1)
Exosome [BR:psiu04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   116753554 (PLOD1)
SSDB
Motif
Pfam: Anp1 2OG-FeII_Oxy
Other DBs
NCBI-GeneID: 116753554
NCBI-ProteinID: XP_032487326
Ensembl: ENSPSNG00000011908
LinkDB
Position
1:9330293..9358203
AA seq 764 aa
MRLQLLLAPLGWLLLVETKGDAKPEDNLLVLTVATKETEGFRRFKRSAQFFNYKIQALGL
GEDWHGEKEMSAGGGLKVRLLKKALEKHADKENLVILFTDSYDVVFASGPRELLKKFRQA
RSQVVFSAEELIYPDRRLEAKYPVVFDGKRFLGSGGFIGYAPNLSKLVAEWEGQDSDSDQ
LFYTKIFLDPEKREGINITLDHRCRIFQNLDGALDEVVLKFEMGQVRARNLAYDTLPVLI
HGNGPTKLQLNYLGNYIPRFWTFETGCAVCDEGLRSLKGIGDEALPTVLVGVFIEQPTPF
LSLFFQRLLRLHYPRKRLRLFIHSHEQQHKTQVEQFLAEHGSEYLSVKLLGPEVQVANAD
ARNMGVDLCRQDRGCTYYFSIDADVALTEPKTLQLLIEQNKNVIAPLMTRHGRLWSNFWG
TLSADGYYARSEDYVDIVQGRRVGVWNVPYISNIYLIKGSALRAELQEMDLFHHSKLDPD
MAFCANIRQQDVFLFLTNRHAFGHLLSLDSYQTTHLHNDLWEVFSNPEDWKEKYIHENYT
KALAGKMVEMPCPDVYWFPIFTETACDELVGEMEHYGQWSLGDNKDNRIQGGYENVPTID
IHMNQINFEREWHKFLVEYIAPMTEKLYPGYYTRAQFDLAFVVRYKPDEQPSLMPHHDAS
TFTINIALNRAGVDYEVRAGQGEGWLGSTHSVVGQRGPGYAGAREPERQGSRSMGTASWK
GWVQSTIWWEGEGFRHNRAAAQEDQDQTAWTWVLPLPSPALCNI
NT seq 2295 nt   +upstreamnt  +downstreamnt
atgcggctccagctgctcctggccccgctgggctggctgctccttgtcgaaacgaagggt
gatgccaagccggaggacaaccttttggtcctcacggtggccacaaaggagaccgagggg
ttccgacgcttcaagcgctcagctcagttcttcaactacaagatccaggcgctggggctg
ggggaggactggcatggggagaaggagatgtcggcaggtggagggctgaaggttcgacta
ctgaagaaagccctggagaagcacgcagacaaggagaacctggtcattctcttcacagac
agctacgacgtggtgtttgcctcggggccccgagagctcctgaagaagttccggcaggcc
aggagccaggtggtcttctctgccgaggagctcatctacccggaccgcaggctggaggcc
aagtacccggtggtatttgacggcaagaggttcctgggctctggaggcttcatcggttat
gcccccaacctcagcaaactggtggccgagtgggagggtcaggacagtgacagtgaccag
ctcttttacaccaagatcttcttggacccggagaagagggaggggatcaatatcaccctg
gaccaccgttgccgtatcttccagaatctggatggagccttggatgaggtggtgctcaag
tttgaaatgggccaagtgagagcaaggaacctggcttacgacaccctcccagtcctgatt
catggcaatgggcctaccaagctgcagctgaactacctgggcaactacatcccacgcttc
tggacctttgagacgggatgtgctgtgtgtgatgagggcctgcgcagcctcaagggcatc
ggggatgaagctctgcccacggtcctggttggtgtgttcatcgaacagcccacgccgttc
ctgtccctgttcttccagcgtctcctgcgcctccactacccccggaaacggctgcggctt
ttcattcacagccatgagcagcaacataagactcaggtggaacagttcctggcagagcat
ggcagcgagtacctgtctgtgaaactgctgggccccgaggtgcaggtggcgaacgcggac
gccaggaacatgggcgtggacttgtgccggcaggaccgtggctgcacctactacttcagc
atagatgccgatgtggccctgaccgagcccaaaaccctgcagctgctaatcgaacagaac
aagaatgtcatcgccccgttaatgacccgccacgggaggctgtggtcgaacttctggggg
acactgagtgcagatggctactacgcccgctccgaggactacgtggacattgtgcagggg
cggcgtgtcggcgtctggaacgtgccctacatctcaaacatctacctgatcaagggcagt
gccctgcgggctgagctgcaggagatggacctattccaccacagcaagctggacccggac
atggccttctgtgccaacatccggcagcaggatgtgttcctgttcctgaccaaccggcac
gccttcggccacctgctgtccctggacagctaccaaaccacccacctccataacgacctc
tgggaggtgttcagcaaccccgaggactggaaggagaagtacatccacgagaactacacc
aaggccctggcagggaagatggtggagatgccttgcccggacgtctactggttccccatc
ttcacggagacggcctgtgatgagctggtgggagaaatggagcactatggccagtggtct
ctgggagataacaaggacaaccgcatccagggtggctacgaaaacgtgccgaccatagac
atccacatgaaccagatcaactttgagcgggagtggcacaagttcctggtggagtacatc
gcccccatgacggagaaactctacccgggctactacaccagggcccagttcgacctggcc
tttgttgtccgctacaagcctgacgagcagccctccctgatgccacaccatgacgcctcc
accttcaccattaacattgccctgaaccgggctggggtggattacgaggtgagggcgggc
cagggggagggctggctggggagtactcacagtgtggtcgggcagaggggcccagggtat
gccggtgccagggaacccgagagacagggttccaggtccatggggacggcttcttggaag
gggtgggttcagagcacaatttggtgggagggagaaggctttagacataatagagcagcg
gcacaggaggaccaggaccagactgcctggacctgggtcctgcctctcccctcaccagct
ctctgtaacatataa

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