Phocoena sinus (vaquita): 116753814
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Entry
116753814 CDS
T07759
Symbol
PROM1
Name
(RefSeq) LOW QUALITY PROTEIN: prominin-1
KO
K06532
prominin 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
116753814 (PROM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psiu04147
]
116753814 (PROM1)
04090 CD molecules [BR:
psiu04090
]
116753814 (PROM1)
Exosome [BR:
psiu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
116753814 (PROM1)
CD molecules [BR:
psiu04090
]
Proteins
116753814 (PROM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prominin
ApoLp-III
Tweety
Filament
DUF948
Zn_ribbon_Top1
UPF0147
Baculo_PEP_C
PLU-1
DASH_Dad2
7TMR-HDED
ATG17_like
ZapB
UPF0114
Motif
Other DBs
NCBI-GeneID:
116753814
NCBI-ProteinID:
XP_032487605
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Position
5:complement(44027494..44125736)
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AA seq
846 aa
AA seq
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MALLLGFLLLLGLYRDTMSEGPPPSSTYIPDGLEFEFPPTSYETRDSYEAGPTGILFQIV
HIFLHMVQPNAFPEDILRKVVQKEFDLSTDYEKIIYYEIGIIICAVLGLLFIILMPLVGF
VFSLCRCCNKCGGEMHQRQKKNGAALKSYFTLSLLVICIFISIGIIYGFVANQHIRTHIE
KTRKLSESNFNDLRTLLNATPGQIDYVLDQYTTTKARAFSDLDNIKLLLGGGIFEQLKPR
VVPVLDDIKAMAEEIQETRETLVEVNSILTDMRQLSANLNNSLSNVKRNLEQALTDPMCS
VHPVMTTCSNIMNSLSLLDGSIDFDQLPSLDEQIGNLNDTLQTNLSSLVQKGYRSFNAIP
EIVQNETVNVVSDVKMTLDSIGSDIKNISKNIPIQDKLSNFIRYLNDTENYIHHHLPTLE
EYDSYRWLGSLVVCCLLTLIVIFNFLGLLCGTYGYDQNATPTRRGCVSNTGGIFLMVGVG
FSFFFCWLLMTIVVLTFVVGGNVEKLVCEPYQNKMLFQVLDTPYLLNADWKYYLSGMVFN
KSDIHLTFEQVYSDCKENKGIYSTLKLENTYNISEHLSIKEHTGNINNNFENMNIRIDNI
VLLDEAGRRNLMDFNSSGIDKIDYGAFMAATGKNPTKVNLLSFANESEVKANPFGECQTP
PGNLKQTLKNNAGILRNIHRDEIIPLQKLMSAVHQKLKELQQKSSGLGVKVANIIRCLDS
AQDFITNRISTIIAEESKKYGNTIISYFEHYLQWVKISITEQMAACKPVATALDSAIDVF
LCSYIIDPLNLFWFGIGKATAFLLPAVIFAVKLAKYYRRMDSEDVYDDDVETIPMKKNGK
CQYWFS
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggcccttctcctcggcttcctgctgctgctggggctttatagggacaccatgtcagag
gggccgccgccatcatccacatacattcctgatggtttggaatttgaatttcctccaacg
agctatgagaccagagattcttatgaagctggacctactggcatcctctttcaaattgtg
cacatcttcctccacatggtgcagccgaatgctttccctgaagatattttaagaaaagtt
gtacagaaggagtttgacctgtcaacggattatgagaagattatctactatgagatcggg
attattatctgtgctgtcctgggattgctgtttattattctgatgcctctggtggggttt
gtctttagtttgtgccgttgctgtaacaagtgtggtggagaaatgcaccagcgacagaag
aaaaatggggccgccctcaagagctactttacactctccctcttggtgatttgtatattt
ataagcattggtatcatctatggttttgtggcaaaccaacacataaggactcacattgaa
aagactcggaaattgtcagaaagtaatttcaacgacttgagaaccctcctgaatgcaact
ccagggcaaattgactatgtactggaccagtataccaccacgaaggcaagggcattctca
gatctggacaatattaagttgttgctgggaggcggaattttcgaacagctcaaacctaga
gtggtccctgtgctggatgacatcaaggccatggcagaagaaatccaagagaccagagaa
accctggtcgaagtgaacagtatcttaacggacatgagacagttatctgcaaatcttaac
aacagcctgagtaacgttaaaaggaacctggagcaagcactcactgaccccatgtgctct
gtgcatccggtaatgaccacttgcagcaacattatgaactctctaagccttctggatggc
agcatcgattttgatcagctcccatctttggatgaacaaattggtaaccttaatgatact
cttcaaacaaatttgtccagcctagtccaaaagggctatagatctttcaatgctatacct
gagatagtgcagaatgaaaccgtgaacgtcgtatcagatgtcaaaatgacgttggattcc
attggttctgatatcaaaaatataagcaaaaatattcctattcaggataagctgtcaaat
ttcattcgttaccttaatgacactgaaaattacatccaccaccatttacccactttggaa
gaatatgattcatacaggtggctgggttccttggttgtctgctgtttactgaccctcata
gtgatttttaatttcctgggcttgttgtgtggcacgtacggctacgaccagaatgccacc
ccaaccagacgaggctgcgtctcaaacactggaggcatcttcctcatggttggggttgga
ttcagtttcttcttttgttggctattgatgaccatcgtggttctgacttttgttgttggt
ggaaatgtggaaaaactggtctgtgaaccttaccaaaacaaaatgttattccaggttttg
gacacgccatatttactaaatgccgattggaaatactatctctctggcatggtatttaac
aaatcagatattcatctcacttttgaacaagtttacagtgattgcaaagaaaataaaggc
atttatagcacacttaagctagagaacacctacaatatcagtgaacatctcagcattaaa
gagcataccggaaacataaataataattttgaaaatatgaatataagaattgacaacata
gttctgctggatgaggcaggaagaagaaaccttatggacttcaattcttcaggaatagac
aaaatagactatggggccttcatggctgcgactgggaaaaatcccacaaaagtgaatctt
ttatcatttgcaaatgaatcagaagtaaaagccaacccatttggtgagtgtcaaacgccc
ccaggaaatttgaaacagaccctgaaaaataatgcaggaatcttaagaaatattcatcgt
gacgaaatcattcctttgcaaaaattaatgagtgctgtgcaccaaaaattgaaggagctt
caacagaaaagcagtggattgggggtgaaagtggccaatatcattcgctgtttggattct
gctcaggacttcatcacaaaccgaatctccacaattattgctgaagaaagtaagaagtat
gggaatacgataatcagctacttcgaacattatctgcagtgggtcaaaatctctatcact
gagcaaatggcagcctgcaaaccagtggccaccgctctagattcggctattgatgtcttt
ctgtgcagctacattattgaccccctgaatttgttttggtttggtataggaaaagctacc
gcatttttacttccggctgtcatttttgccgtaaagctggctaagtactaccgtcgaatg
gattctgaagatgtatatgacgatgatgttgaaactatacccatgaaaaaaaatggaaaa
tgccaatattggttctcgtag
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