Phocoena sinus (vaquita): 116753860
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Entry
116753860 CDS
T07759
Symbol
RAPGEF2
Name
(RefSeq) LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 2
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04010
MAPK signaling pathway
psiu04015
Rap1 signaling pathway
psiu04517
IgSF CAM signaling
psiu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116753860 (RAPGEF2)
04015 Rap1 signaling pathway
116753860 (RAPGEF2)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116753860 (RAPGEF2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116753860 (RAPGEF2)
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Paralog
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
RA
PDZ
cNMP_binding
PDZ_6
RA_2
PDZ_2
ABhydrolase-like_N
Motif
Other DBs
NCBI-GeneID:
116753860
NCBI-ProteinID:
XP_032487690
Ensembl:
ENSPSNG00000002798
LinkDB
All DBs
Position
5:complement(136619579..136867778)
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AA seq
1674 aa
AA seq
DB search
MASYVDNSFRQAVMKNPAERTPQDLEIVYSYLHGMEALSNLREHQLRLMCETVRYERHEA
NEVLYYPDDIGTCWYILLSGSVFIKESMFLPRSSFGKRSAGSFRRGCECIVLEPSEMIVV
RILLLDYMDENEEYFXRQASHRQSRRRFRKXNQKGERQTIIDTVDPYPVGKTPLPRGYHT
ECTKSQLPADFTKLHLTDSLHPQVTHVSSSHSGCSITSDSGSSSLSDIYQATESEAGEMD
LSGLPETAVDSEDDDDEEDIERASDPLMSRDIVRDCLEKDPIDRTDDDIEQLLEFMHQLP
AFANMTMSVRRELCAVMVFAVVERAGTIVLNNGEELDSWSVILNGSVEVTYPDGKAEILC
MGNSFGVSPTMDKEYMKGVMRTKVDDCQFVCIAQQDYCRILNQVEKNMQKVEEEGEIVMV
KEHRELDRTGTRKGHIVIKGTSERLTMHLVEEHSVVDPTFIEDFLLTYRTFLCSPMEVGK
KLLEWFNDPSLRDKVTRVVLLWVNNHFNDFEGDPAMTRFLEEFENNLEREKMGGHLRLLN
IACAAKAKRRLMTLTKPSREAPLPFILLGGSEKGFGIFVDSVDSSSKATEAGLKRGDQIL
EVNGQNFENIQLSKAMEILRNNTHLSITVKTNLFVFKELLTRLSEEKRNGAPHLPKIGDI
KKASRYSIPDLAVDVEQVIGLEKVNKKSKANTVGGRNKLKKILDKTRISILPQKPYNDIG
IGQSQDDSIVGLRQTKHIPTALPVSGTLSSSNPDLLQSHHRILDFSATPDLPDQVLRVFK
ADQQSRYIMISKDTTAKEVVIQAIREFAVTTTPDQYSLCEVSVTPEGVIKQRRLPDQLSK
LADRIQLSGRYYLKNNMETETLCSDEDAQELLRESQISLLQLSTVEVATQLSMRNFELFR
NIEPTEYIDDLFKLRSKTSCANLKKFEEVINQETFWVASEILRETNQLKRMKTIKHFIKI
ALHCRECKNFNSMFAIISGLNLAPVARLRTTWEKLPNKYEKLFQDLQDLFDPSRNMAKYR
NVLNSQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAKEIRHVGRMASVN
MDPALMFRTRKKKWRSLGSLSQGSTNATVLDVAQTGGHKKRVRRSSFLNAKKLYEDAQMA
RKVKQYLSNLELEMDEESLQTLSLQCEPATNTLPKNPGDRKPVKADTSPVAPRAGLQPKP
PPQAPQPSQRPGPGLQLPAVPLYPSRKKVPLRDLPPFGINSPQALKKILALSEEGSLERH
KRPAEDTVSDASSRLSSPPTSPQSSPRKGGSGSQLRSFGCGQLDXTSSPSSRGSYTLAPS
GTVDNFSDSGHSEISSRSSIVSNSSFDSLPVSLPDERRQRPPAGTVEASLAAGRPERRPA
GEPDQCSLGSCAPLSESRGLYAAATVISSPSTEELSQDQGDRASLDAADSGRGSWTSCSS
GSHDNIQTIQHQRSWETLPFGHTHFDYSGDAAGLWASSSHADQIMFSDHSTKYNRHSQSR
ESLDQAQSRASWASSTGYWGEDSEGDTGTIKRRGGKDVSLEAESSSMVSATAEEAKPVAM
AAHVAVPPSATKGLIARKEGRYREPPPTPPGYVGIPITDFPDAHPHPARKPPDYTVALQR
SRMLARPAETPAPGGARPAPRPQWHRPGDDPRPGPCAPPGLAAEEDEDEQVSAV
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctacgtggataacagcttccgccaggcggtgatgaagaacccggccgagagg
accccccaggatctggaaatagtgtattcctatttacatggtatggaagccttatccaac
ctgagggagcatcagcttaggttaatgtgtgaaactgtgagatacgaaagacatgaagcc
aatgaagttttatactatcctgatgatattgggacctgctggtacatcctcctctctggt
tccgtgttcatcaaggaatccatgtttctaccacgaagcagttttggcaagcgttctgca
ggaagctttaggcgtggctgtgaatgcattgtgttagagccttctgaaatgattgtggta
agaatacttctgttagactatatggatgaaaatgaagaatatttcnagcgtcaagcttct
catcgacagtctcgaaggagatttagaaaantcaaccagaaaggggaaagacaaacgatt
attgatactgtggatccttatcctgtgggcaaaacacctttgcctagaggctatcatacg
gaatgcactaaatctcagcttcctgcagatttcacaaagctacacctcaccgacagtctc
cacccacaggtgactcacgtctcctccagccactcaggatgtagcatcaccagtgattct
ggaagcagcagtctttctgatatctaccaggccacagaaagtgaggctggtgagatggac
ctgagcgggttaccggagacagcagtggactctgaagatgatgacgacgaagaggacatc
gagagagcctcggaccctctgatgagcagggacattgtgcgagactgcctggagaaagac
cccatcgacaggacagacgatgacatcgagcaactccttgaatttatgcaccagctgccg
gcttttgccaacatgacgatgtcggtgaggcgggagctctgtgctgtgatggtgtttgca
gtggtggaaagagccgggaccatcgtgttaaacaacggtgaagagctggactcctggtca
gtgattctgaatggttctgtggaagtgacttacccagatggaaaagcagaaatactatgt
atgggaaatagtttcggtgtctctcctactatggacaaggaatacatgaaaggagtgatg
aggacaaaggtggatgactgccagtttgtctgcatagcccagcaagattactgccgtatc
ctcaaccaagtagaaaagaacatgcaaaaagttgaagaggaaggagagatcgtcatggtg
aaggagcaccgagagctcgatcgaacgggaacaaggaaggggcacatcgtcatcaagggc
acctcagaaagattaacgatgcatttggtggaagagcattcggtggtggatccgacgttt
atagaggacttcctgttgacctataggactttcctctgcagcccgatggaagtgggcaaa
aagttgttggagtggtttaatgacccgagcctcagggataaggttacacgggtagtatta
ttgtgggtgaataatcacttcaatgacttcgaaggggatcctgcgatgactcgatttcta
gaagaatttgaaaataatctggaaagagagaaaatgggtggacatctaaggctattaaat
attgcttgtgctgctaaagcaaaaagaagattgatgacactcacaaaaccatcccgagaa
gctcccttgcctttcatcttacttggaggctcagagaaaggatttggaatctttgttgac
agtgtagattcaagtagcaaagcaaccgaggcaggcttgaaacgaggggaccagatatta
gaagtaaatggtcaaaactttgaaaatattcagctgtcaaaagccatggaaattcttaga
aataacacacacttatctatcactgtgaaaaccaatttatttgtgtttaaagaacttcta
acaagattgtcagaagagaagagaaatggtgcccctcacctccctaaaattggagacatc
aaaaaggccagtcgctactccattccagatctcgctgtagacgtagaacaggtgatagga
cttgaaaaagtaaataagaaaagtaaagccaacactgttgggggaaggaacaagctaaaa
aagatactggacaagactcggattagtatcttgccacaaaaaccatataacgacatcggg
attggtcagtctcaggatgacagtatagtcggattaaggcagaccaagcacatcccgacc
gcgctgcccgtcagcggaaccttatcatccagtaatcctgatttactgcagtcccatcat
cgcattttagacttcagtgctactcctgacttgccagatcaagtgctaagggttttcaag
gctgaccagcaaagccgatacatcatgattagtaaggacaccacggcgaaggaagtggtc
attcaggccatccgggagtttgctgtgaccaccaccccagatcagtactccctctgtgag
gtctctgtcacaccagagggagtgatcaaacaaagacgacttccggatcagctttccaaa
cttgccgacagaatacagctgagtggaaggtattacttgaaaaacaacatggagacagag
accctttgttcggatgaagatgctcaggagctgctgagagagagccagatctccctgctg
cagctcagcaccgtagaggtggccacgcagctctccatgcggaactttgagctcttccgc
aacatcgaacctactgagtacatagatgacttatttaagctcagatcgaaaaccagctgt
gccaacctgaagaaattcgaggaggtcattaaccaggagacgttttgggtagcctctgag
attctgcgggagacgaaccagctgaagaggatgaagaccattaagcatttcatcaagata
gctctgcactgcagggagtgcaagaattttaactccatgtttgcaatcatcagcggccta
aacctggcaccagtggcaagactgcgaaccacctgggaaaaacttcccaataaatacgaa
aagctgtttcaggatctccaagacctgtttgatccttccagaaacatggcgaaataccgc
aatgtcctcaacagtcaaaacctacagcctcccatcatccccctgttcccggtgatcaag
aaggacctcacgttccttcacgaggggaacgactccaaagtcgacgggctggtcaatttt
gagaagctaagaatgattgcaaaagaaattcgtcacgttggccgaatggcctctgtgaac
atggaccctgccctcatgttcaggactcggaagaagaagtggaggagtctggggtctctc
agccagggtagtacaaacgcaacagtgctagacgttgctcagacaggtggtcacaaaaag
cgggtgcgtcgtagctcctttctcaatgccaaaaagctttacgaggatgcccaaatggct
cgaaaagtgaagcagtacctgtccaatttggagctggagatggacgaggagagccttcag
acgttatccctgcagtgcgagccggccaccaacacattgcctaagaaccccggtgacaga
aagcctgtcaaggccgacacctccccggtggccccgagggcagggctgcagccgaagccg
ccgccgcaggctccgcagccgtcacagaggcccggcccgggactgcagcttcccgccgtg
cccctctatccttcgcggaagaaagtgcccctacgggatctcccgcctttcggtataaac
tctccacaagctttaaagaagattcttgctttgtctgaagaagggagcctggagcgccac
aagaggccggcagaagacaccgtatcggatgcgtcctcccggctctcctccccaccgacc
tccccgcagagctcgccaaggaagggtggcagtggcagtcagctgagatcgtttggctgc
gggcagttggactaaaccagctccccgtcttctcgtggaagctacactttggctccgagt
ggcaccgtggataacttctcagattccggccacagcgaaatctcctcgcggtccagtatc
gtcagcaactcctccttcgactcgctgcccgtctcgctgcccgacgaacggcgccagagg
ccaccggccggcactgtggaggccagcctggccgcaggccggccggagaggcggccggcg
ggggagcccgaccagtgcagcctggggtcctgtgcaccgctgtccgagagccggggcctg
tacgctgcagctacagtgatctcttctcccagcacagaggagctttcccaagaccagggg
gaccgagcctcacttgacgctgctgacagtggccgagggagctggacgtcgtgctccagc
ggctcccatgataacatccagaccatccagcaccagaggagctgggagacgctccccttc
gggcacactcactttgattattcaggggacgccgcagggttatgggcctcaagcagccac
gcggaccaaatcatgttttccgaccacagcacaaagtataacaggcacagtcagagccga
gagagtctcgatcaagcccagtcccgggcaagctgggcctcctccacggggtactgggga
gaagactcggagggggacacgggcacaatcaagcgaaggggggggaaggacgtttccctc
gaagctgaaagcagcagcatggtgtctgcgaccgccgaagaagccaagcccgtcgccatg
gctgcccacgtggccgtgccacccagcgccaccaaggggcttattgcgaggaaggagggc
cgctaccgggagccgccgcccaccccgccgggatacgtgggcatccccatcaccgacttc
cccgacgcccacccgcaccccgcccggaagccgccggactacaccgtggcgctgcagcgg
tccaggatgctggcccggccggccgagacccccgccccgggcggcgccaggcccgccccg
cggccgcagtggcaccggcccggcgacgacccgcgccccggcccctgcgcgcccccgggc
cttgccgccgaggaggacgaagatgaacaagtgtctgcggtttga
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integrated database retrieval system
