Phocoena sinus (vaquita): 116753918
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Entry
116753918 CDS
T07759
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein with serine-rich domain 1-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03013
Nucleocytoplasmic transport
psiu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116753918
03015 mRNA surveillance pathway
116753918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116753918
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116753918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SR-25
Motif
Other DBs
NCBI-GeneID:
116753918
NCBI-ProteinID:
XP_032487850
LinkDB
All DBs
Position
5:complement(30640987..30642597)
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AA seq
370 aa
AA seq
DB search
MNFGRKKALDVRAVPTPCRIREGTLVGREDRLQYSKGNRNAGFSTGSSSGCGSSSASSHS
GSSSSSPGSPSPSWRRHDSRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHAGRLTRNVTE
DHMEIFSTYGKIKMIDVPVERMHPHLSTGYAYVECENPDGAEKVLKHADGGHIDGQQITA
AAVLAPWPRPPPRRFSPPRRRVPPPPPMWCRPPPPPRRRRRSHPPRLRSPSRRSPRSCSS
FNSSRCAGPPKLCPTKEDRLERNPLPGQASKVKAVIATFPLAAEFRLQERYWFGGVLIKM
PSSLLAKAYAFLVPDRQFSGRAAGRSRGLQEVVQPQPGSMFSHSTDDLGPIWWPAGSHGK
SVLLRNCRSC
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaactttggaaggaaaaaggctctcgatgtgcgtgccgtccccacaccgtgccgcatc
cgggaggggactcttgtgggccgcgaggatcgactgcagtactccaagggcaaccgaaat
gctggttttagcacgggctccagcagcggctgcggctcctcttcagcctcgagccactcc
ggaagttccagcagctcccctggctctccgagcccttcttggcgcaggcatgacagcagg
cggcgttcccgctccaaatccaaaccacccaaaagagatgaaaaggaaaggaaacggcgg
agcccttcccctaaacccaccaaagtgcacgctggaaggctcaccaggaatgtgaccgag
gatcatatggagatattctccacctacgggaaaattaaaatgattgacgtgcctgtagaa
aggatgcacccccatctgtctacaggctacgcatatgtggagtgtgagaatccagatgga
gctgagaaggtgctgaagcacgcggacggaggacacatcgatggccagcagatcactgcc
gctgctgtgctggccccctggcctcggccaccccccaggcgattcagccctcccaggagg
agagtgccgccaccgcctcccatgtggtgcaggccccccccccccccacggaggaggaga
aggtcgcatccccctcggctcaggtcccccagccgccgcagtcccaggagctgctccagc
ttcaactcctcccggtgcgcagggccaccgaagctctgccctacgaaggaggatcggttg
gaaagaaatcccttacccgggcaggcctcgaaggtgaaggcagtaattgccacgtttccc
ctggcagcagagttccggctgcaggagcgttattggtttgggggcgtgcttataaagatg
ccctccagtcttctggctaaagcttacgcatttctagttcctgacaggcagtttagtggc
agagccgcagggaggagcagggggctccaggaggtggtacagccccagcctgggagcatg
ttttcccattccacagatgacctggggcccatctggtggcctgcagggtcccacgggaaa
agtgtgcttttacgcaactgccgttcttgttag
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