Phocoena sinus (vaquita): 116753987
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Entry
116753987 CDS
T07759
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 60-like
KO
K12029
tripartite motif-containing protein 60/61
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116753987
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116753987
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-B_box
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
116753987
NCBI-ProteinID:
XP_032487890
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All DBs
Position
5:complement(103663490..103668668)
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AA seq
364 aa
AA seq
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MPVQCNVKLVNLCSLEEDIHFSLGLELEQALPEGAFLSTTFVLNSVEFVRALVQAQEVSS
YPICVDNSKDPVTINCGHSFCCSCISMTWKDLGDTFPCPVCHFWFGDKNIRSKPXLSHLT
EVANLLQIRRSTWKGQEENSVCEKHNQFLTLFCGKDLEVLCTQCCFSIQHQKHYNCPIMK
AASHHRKILECTIEPLKSDMEQVEKVITLQASQSVEREKQVKCRREEINFECEQFRLFLR
NQQEDILRQMEDEEMDILTKLCENFVTFTDHAFILKHLLREVGESCHDIRTTTLQMCSSK
FAAVGFRKALTEELAALEKTGVKTCLCPNFINTGFIKNPRTSGNYFQHFEEHRFGHLFMY
RLNV
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgccggtccagtgcaacgtaaagctggtcaatctatgttctctggaggaggatatccac
ttctcactgggtcttgagcttgagcaggccttgccagagggagcattcttatccacgact
tttgttctcaactcagtggagttcgtgagagccctggtacaggcacaagaggtgtctagc
taccccatctgtgtggataactcgaaagatccagtaaccatcaactgtgggcacagcttc
tgttgctcatgcatcagtatgacttggaaggacctaggtgataccttcccctgtcccgtc
tgccatttttggtttggagacaagaacatcaggagcaaacccnagctcagtcatttgact
gaagttgctaatttactccagatcagaaggagcacgtggaaggggcaggaagagaattct
gtgtgtgagaagcacaatcagtttctgacccttttttgtgggaaggacctagaggtttta
tgtacacagtgctgtttctccattcaacaccagaaacactacaattgccccatcatgaaa
gctgcctctcatcacaggaaaattctagaatgtaccattgagcccttgaagagtgatatg
gaacaagttgaaaaagtgataactctgcaagccagccaatcagttgaacgtgagaaacag
gttaaatgtaggagagaagaaataaattttgaatgtgagcaatttagactgtttctacgg
aatcagcaagaggatattcttaggcagatggaagatgaagagatggacattttaacaaaa
ctctgtgaaaactttgtaacatttacagatcatgctttcatactgaaacatctgctgagg
gaggtaggggaatcttgccatgacataagaacaaccactctgcagatgtgttcaagcaag
tttgctgctgttggatttcgtaaagctttgactgaagaactggctgccttagaaaaaact
ggagtcaaaacatgtctctgccctaatttcataaatactggcttcatcaaaaacccaaga
accagtggaaactactttcaacattttgaagaacatcgatttggtcatctctttatgtac
agattaaatgtataa
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