Phocoena sinus (vaquita): 116753988
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Entry
116753988 CDS
T07759
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 60-like
KO
K12029
tripartite motif-containing protein 60/61
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116753988
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116753988
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
PRY
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4_3
TRAF3_RING
zf-RING_2
zf-RING_5
zf-B_box
Motif
Other DBs
NCBI-GeneID:
116753988
NCBI-ProteinID:
XP_032487891
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All DBs
Position
5:complement(103744225..103749878)
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AA seq
367 aa
AA seq
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MVGSQVAFLPAPPPSCTMSPVLCPVPVTLGVVSVEWTLEQDSGFESGLCRLSAGSLGAQP
WYSHKRCLATPICVDNWKDPVTINCGHNFCHSCINMAWKDLGDTFPXLSHLTEIANLLQI
RRSTWKGQKESSVCEKHNQFLTLFXGKDLEVLCTQCSFFIQQWKHYICPIKKAASHHKKI
LRVPLSPXKSDMEQVEKVITLQASQSVEQRKQVKYRREEINSECEQIRLFLQNQQEDIPR
QMEDEEMDILTKLYENFVTFTDHASTLKHLLREVAGKCVQSELELLRQVKSIQCKYQILK
CSEXFSFQLNKYGFNLPLQYSGIDRITKPFLVDVILDLETTHPQLIVSEDGKIVQYGKRK
PNFLLPK
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggtggggtctcaagtagccttccttccagccccacctccaagctgcacaatgtcccct
gtcctctgccctgtcccagtgaccctaggtgtggtcagtgtggagtggactctggaacaa
gactctgggtttgagtccgggctctgccggttatcagctggaagcttgggagcacagcct
tggtacagccacaagaggtgtctagctacccccatctgtgtggataactggaaagatcca
gtaaccatcaactgtgggcacaacttctgtcactcatgcatcaacatggcttggaaggac
ctaggtgataccttccccnagctcagtcatttgactgaaattgctaatttactccagatc
agaaggagcacgtggaaggggcagaaagagagttctgtgtgtgagaagcacaatcagttt
ctgaccctttttnnagggaaggacctagaggttttatgtacacagtgcagtttcttcatt
caacaatggaaacactacatttgccccattaagaaagctgcctctcatcacaagaaaatt
ctacgtgtaccgttgagccctntgaagagtgatatggaacaagttgaaaaagtgataact
ctgcaagccagccaatcagttgaacagaggaagcaggttaaatataggagagaagaaata
aattctgaatgtgagcaaattagactgtttctacagaatcagcaagaggatattcccagg
cagatggaagatgaagagatggacattttaacaaaactctatgaaaactttgtaacattt
acagatcatgcttccacattgaaacatctgctgagggaggtagcgggtaagtgtgtgcag
tcagaactggaattactgaggcaggttaagagtatccagtgcaagtatcaaatcctgaaa
tgctctgagncattttcattccaattaaacaagtatggatttaaccttcctctacaatat
tctggcattgatagaattaccaagccatttctagtagacgtgattttagaccttgaaaca
acacatcctcaacttattgtctccgaggatggaaaaattgtgcaatatggaaagagaaag
ccaaactttttattacccaagtag
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