Phocoena sinus (vaquita): 116754045
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Entry
116754045 CDS
T07759
Symbol
PDGFRA
Name
(RefSeq) platelet-derived growth factor receptor alpha isoform X1
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu01521
EGFR tyrosine kinase inhibitor resistance
psiu04010
MAPK signaling pathway
psiu04014
Ras signaling pathway
psiu04015
Rap1 signaling pathway
psiu04020
Calcium signaling pathway
psiu04072
Phospholipase D signaling pathway
psiu04144
Endocytosis
psiu04151
PI3K-Akt signaling pathway
psiu04510
Focal adhesion
psiu04540
Gap junction
psiu04630
JAK-STAT signaling pathway
psiu04810
Regulation of actin cytoskeleton
psiu05163
Human cytomegalovirus infection
psiu05200
Pathways in cancer
psiu05206
MicroRNAs in cancer
psiu05214
Glioma
psiu05215
Prostate cancer
psiu05218
Melanoma
psiu05230
Central carbon metabolism in cancer
psiu05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116754045 (PDGFRA)
04014 Ras signaling pathway
116754045 (PDGFRA)
04015 Rap1 signaling pathway
116754045 (PDGFRA)
04630 JAK-STAT signaling pathway
116754045 (PDGFRA)
04020 Calcium signaling pathway
116754045 (PDGFRA)
04072 Phospholipase D signaling pathway
116754045 (PDGFRA)
04151 PI3K-Akt signaling pathway
116754045 (PDGFRA)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116754045 (PDGFRA)
09144 Cellular community - eukaryotes
04510 Focal adhesion
116754045 (PDGFRA)
04540 Gap junction
116754045 (PDGFRA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
116754045 (PDGFRA)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116754045 (PDGFRA)
05206 MicroRNAs in cancer
116754045 (PDGFRA)
05230 Central carbon metabolism in cancer
116754045 (PDGFRA)
05231 Choline metabolism in cancer
116754045 (PDGFRA)
09162 Cancer: specific types
05214 Glioma
116754045 (PDGFRA)
05218 Melanoma
116754045 (PDGFRA)
05215 Prostate cancer
116754045 (PDGFRA)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
116754045 (PDGFRA)
09176 Drug resistance: antineoplastic
01521 EGFR tyrosine kinase inhibitor resistance
116754045 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
psiu01001
]
116754045 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
psiu04090
]
116754045 (PDGFRA)
Enzymes [BR:
psiu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
116754045 (PDGFRA)
Protein kinases [BR:
psiu01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
116754045 (PDGFRA)
CD molecules [BR:
psiu04090
]
Proteins
116754045 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
V-set
VEGFR-1-like_Ig-like
Herpes_gE
Kinase-like
Motif
Other DBs
NCBI-GeneID:
116754045
NCBI-ProteinID:
XP_032487964
Ensembl:
ENSPSNG00000000217
LinkDB
All DBs
Position
5:75007334..75054931
Genome browser
AA seq
1120 aa
AA seq
DB search
MGTSHWALLVLGCLVTGPSLILCQLSLPSILPSENERIVQLNSSFSLRCFGESEVSWQYP
MSEEENPNVEIRDEENNSGLFVTVLEVVSASAAHTGLYTCYYNHTQLEESEIEGRRIYIY
VPDPDVAFVPLGMTDYLVIVEDDDSAIIPCRTTDPETPVILLSSDGVVHASYDSRQGFNG
TFTVGPYICEATVRGKKFQTIPFNVYALKATSELDLEMEALKTVYKAGESIVVTCAVFNN
EVVDLQWTYPGQVKGKGITMLEETKVPSIKLVYTLMVPEATVKDSGDYECAARQATKEVK
EMKKVTISVHGTFCYPKCPPAVLLGDPLCSNRCLTETFPCTEKGFIEIKPNFSPLEAVNL
HEVKHFVVDVQAYPPPRIAWLKDNLTLIENLTEITTDIEKIQEIRYRSKLKLIRAKEEDS
GHYTIVVQNEDDVKSYTFELLTQVPSSILDLVDDHHGSNGGQTVRCTAEGTPLPDIEWMI
CKDIKKCNNETSWTILANNVSNIITEVHPRDRSMVEGQVTFAKVEETIAVRCLAKNLLGV
ESRELKLVAPTLRSELTVAAAVLVLLVIVIISLIVLVVIWKQKPRYEIRWRVIESISPDG
HEYIYVDPMQLPYDSRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKML
KPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKN
RDSFLSRHPEKPKKELDIFGLNPADESTRSYVILSFENNGDYMDMKQADTTQYVPMLERK
EVSKYSDIQRALYDRPASYKKKSMLDSEVKNLLSDDNSEGLTLLDLLSFTYQVARGMEFL
ASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFD
NLYTTLSDVWSYGILLWEIFSLGGTPYPGMMVDSTFYNKIKSGYRMAKPDHATSEVYEIM
VKCWNSEPEKRPSFYHLSEIVENLLPGQYKKSYEKIHLDFLKSDHPAVARMRVDSDNAYI
GVTYKNEEDKLKDWEGGLDEQRLSADSGYIIPLPDIDPVPEEEDLGKRNRHSSQTSEESA
IETGSSSSTFIKREDETIEDIDMMDDIGIDSSDLVEDSFL
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggggacttcccattgggcactcctggtcttaggctgtctcgtcacagggccaagcctc
atcctctgccagctttcattaccctccatcctgcccagtgaaaacgagaggattgtgcag
ctgaactcatccttttctctgagatgcttcggggagagtgaagtgagctggcagtacccc
atgtctgaagaagagaaccccaatgtggaaatcagagacgaggagaacaacagtggcctt
tttgtgacggtgctggaagtggtcagtgcctcggcggcccacacagggctgtacacttgc
tactacaaccacacgcagttggaagaaagcgagatcgagggcagacgcatttacatctat
gtgccagacccagatgtagccttcgtacctctaggaatgacagattacttggtcatcgtg
gaggacgatgattctgccatcatcccttgtcgaacgactgatcctgagacaccagtgatt
ttactcagcagtgacggggtggtgcacgcctcctatgacagcagacaaggctttaatgga
accttcactgtcggaccctatatctgcgaggccaccgtcagggggaagaagttccagacc
atcccattcaatgtttatgctttaaaagcaacatcagaacttgatctggaaatggaagct
cttaaaactgtctataaggcaggggaatcgattgtggtcacctgcgctgtctttaacaat
gaggttgtggaccttcagtggacttaccctggacaagtgaaaggcaaaggcatcacaatg
ctggaggagaccaaggtcccgtccatcaagttggtgtacactctgatggtccctgaggcc
acggtgaaagatagtggagattacgaatgtgctgcccgccaggccaccaaggaggtcaaa
gaaatgaagaaagtcaccatctctgtgcatggtacattctgctatccaaaatgtccaccg
gctgtgctgctcggggatccactatgcagtaatcgttgtttaacggaaacttttccctgt
acagagaaagggtttattgaaatcaaacccaacttcagcccgttggaagccgtcaacctg
catgaagtcaaacattttgtggtggacgtgcaggcctacccccctcccaggatagcctgg
ctcaaggacaacctgactctgattgagaatctcacggagatcaccactgacatagaaaag
attcaggaaataaggtatcgaagcaaattaaagctgatccgagctaaggaagaagacagc
ggccattatactattgtagttcaaaatgaagacgatgtgaagagctatacttttgaactc
ttaactcaagttccgtcatccattctggacttggtcgacgaccaccatggctctaatggg
ggccagacagtgagatgcacagctgaaggaacccctcttcctgatattgagtggatgatt
tgcaaggatattaagaaatgtaataacgaaacttcatggacgattttggccaacaatgtc
tcaaacatcatcacggaggtccacccccgagacaggagcatggtggagggccaagtgaca
ttcgccaaagtggaggagaccattgcagtacgatgcctggctaagaatctcctcggggtg
gagagccgagagctgaagttggtggctcccactctgcgttctgaactcacggtggcggcc
gcagtcctggtgttgttggtgattgtaatcatctcactcattgtcctggttgtcatttgg
aaacagaaaccaaggtatgaaattcgttggagggtcattgaatcaatcagccccgatgga
catgaatatatttatgtggacccgatgcaactgccttatgactcgagatgggagtttcca
agagatggactagtgcttggtcgtatcctgggctctggtgcatttgggaaagtggttgaa
ggaactgcctatggattaagtcggtcccaacctgtcatgaaagtagcagtgaagatgcta
aaacccacagccagatccagtgaaaaacaagccctcatgtccgaactgaagataatgacc
cacctggggccgcacttaaacattgtgaacttgctgggagcctgcaccaagtcaggcccc
atttacatcatcactgagtactgcttctatggggatttggtcaactatttgcataagaat
agagacagcttcttgagccgccacccagagaagccaaagaaagagctggacatttttgga
ttgaaccctgctgacgaaagcacacgaagttacgttattttatcttttgaaaacaacggt
gactacatggacatgaagcaagctgacacgacacagtatgtccccatgctggaaaggaaa
gaggtttctaagtactcagacatccagagagcgctgtatgatcgcccagcctcatataag
aagaaatccatgttagactcagaagtcaaaaacctcctttcggatgataactcagaaggc
cttactttgttggatttgttgagctttacctatcaagttgcccgaggaatggagtttttg
gcttcaaaaaattgtgtccaccgggacctggccgctcgcaatgtcctcctggcgcaaggg
aaaatcgtgaagatctgtgactttggcctggccagagacatcatgcatgattcgaactac
gtgtcaaaaggcagcacctttctcccggtgaagtggatggctcctgagagcatcttcgac
aacctctacaccacactgagtgacgtctggtcttacggcattctgctctgggagatcttt
tccctcggtggtacaccctaccctggcatgatggtggattctactttctacaataagatc
aagagtgggtaccggatggccaagcctgaccacgccaccagtgaagtctatgagatcatg
gtgaagtgctggaacagtgagccagagaagagaccctccttttaccacctgagtgagatt
gtggagaatctgctgcccggacaatataaaaagagttatgaaaagatccacctggacttc
ctgaagagtgaccatcccgccgtggcacgtatgcgcgtggactccgacaatgcgtacatt
ggcgtcacctacaaaaacgaggaggacaagctgaaggactgggagggtggccttgacgag
cagaggctgagcgcagacagtggctacatcatccctctgcctgacattgaccctgttcct
gaagaggaagacttgggcaaaaggaacagacacagctcgcagacctctgaagagagtgcc
attgagacaggttccagcagttctaccttcatcaagagagaggatgagaccatcgaggac
atcgacatgatggacgacattggcatagactcctcggacctggtggaagacagcttcctg
taa
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