Phocoena sinus (vaquita): 116754091
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Entry
116754091 CDS
T07759
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116754091 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psiu03041
]
116754091 (DHX15)
03009 Ribosome biogenesis [BR:
psiu03009
]
116754091 (DHX15)
Enzymes [BR:
psiu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116754091 (DHX15)
Spliceosome [BR:
psiu03041
]
Complex A
U2 snRNP components
U2 related factors
116754091 (DHX15)
Complex B
116754091 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
116754091 (DHX15)
Ribosome biogenesis [BR:
psiu03009
]
Eukaryotic type
90S particles
Helicases
116754091 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
Atrophin-1
nSTAND3
AAA_29
Flavi_DEAD
AAA_25
Motif
Other DBs
NCBI-GeneID:
116754091
NCBI-ProteinID:
XP_032488138
Ensembl:
ENSPSNG00000020699
LinkDB
All DBs
Position
5:complement(52002033..52053684)
Genome browser
AA seq
795 aa
AA seq
DB search
MSKRHRLDLGEDYPSGKKRAGTDGKDRDRDRDREDRSKDRERERDRGDREREREKEKEKE
LRASTNAMLISAGLPPLKASHSAHSTHSAHSAHSTHSAHSTHTGHAGHTSLPQCINPFTN
LPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRS
LPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM
LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF
QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQE
EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGK
CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCF
VRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV
RQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQ
LHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQL
DRIIAKLQSKEYSQY
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcgacaccggttggacctgggggaggattacccctccggcaagaagcgtgcg
gggaccgatgggaaggatcgagatcgtgaccgtgatcgtgaagatcggtctaaagatcga
gaacgagaacgagatagaggagatagagagcgggagagggagaaagaaaaggagaaagag
ttgcgagcttccacgaatgctatgcttatcagtgctggattaccacctttaaaagcttcc
cattcagctcactcaacccactcggcacattcagcacattcaacacattctgctcattct
acacacaccggacatgcaggacacacatcacttccacagtgcattaatccatttaccaac
ttaccccatacgcctcgatactatgatattctgaagaaacggcttcagctccctgtttgg
gaatacaaggataggtttacagatattctggttagacatcaatcctttgtacttgttggt
gagactgggtctggtaaaacaacacagattccacagtggtgtgtggagtacatgcgatca
ttaccaggacccaaaagaggagttgcctgtacccaacccaggagagtggctgcaatgagt
gtggcccagagagttgctgatgaaatggatgtgatgttgggccaggaagttggttactcc
attcgatttgaagactgcagtagtgcaaaaaccattcttaagtatatgactgatgggatg
ttacttcgtgaagctatgaatgatcctctcttggagcgttatggtgtaataattcttgat
gaggctcatgaaaggacattggctacagatattctcatgggtgttctgaaggaggttgtt
agacagagatcagatttaaaggttatagttatgagcgctactctagatgcaggaaaattc
cagatttactttgataactgtcctctcttaactattcctgggcgtacacatcctgttgag
atcttttatactcccgaaccagagagagattatcttgaagcagcaattcgaaccgtgatc
cagattcatatgtgtgaagaagaggaaggagatcttctacttttcttaactggtcaagag
gaaattgatgaagcctgtaagagaataaagcgtgaggttgatgatttgggccctgaagtt
ggtgacattaaaatcattccactgtactctacactcccacctcagcagcagcaacgcatt
tttgagcctccgcctccaaaaaagcagaacggagcaattggaagaaaggttgttgtgtca
actaacattgcagagacatctttgacaatagatggtgtggtatttgtgattgatcctgga
tttgcaaaacaaaaggtatataatcctcgaatcagagtcgagtcccttttagtgacagcc
attagtaaagcttcagctcagcaaagggctggtcgagctggacgaaccagacctgggaag
tgcttcagactttatacagagaaagcttacaaaacagaaatgcaggataacacctatcct
gagattttgcgttctaatttaggatcagttgtgttacaattgaagaaacttggtattgat
gatttggtgcattttgattttatggatccaccagctcctgaaactctgatgagagcccta
gaacttttgaattatctggctgctttaaatgatgatggagatctgactgaattgggatcc
atgatggctgagtttcctctagatccacagctcgctaaaatggttattgcaagttgtgac
tacaactgttctaatgaggtcctatctattactgctatgttgtcagtcccacagtgtttt
gttcgccccacggaggccaagaaagccgcagatgaggccaagatgagatttgcccacata
gatggagatcatctgacactgctgaatgtctaccacgcttttaaacaaaatcatgaatcg
gttcagtggtgttatgacaacttcattaactacaggtccctgatgtcagcagacaatgta
cgccagcagctatcgagaattatggacagatttaacttgcctcgtcgaagtactgacttt
acaagcagggactattatattaatataagaaaagctttggttactgggtattttatgcag
gtggcacatttagaacgaacagggcattacttaactgtgaaagataaccaggtggttcag
ttgcatccctctactgttcttgaccacaagcctgaatgggtgctttataatgagtttgtt
cttacaacaaagaattacatccggacgtgtacagatatcaagcccgaatggttggtgaaa
attgcccctcaatattatgacatgagcaatttcccacagtgtgaagcaaagagacagttg
gaccgcatcattgccaaactgcaatccaaggaatattcacagtactga
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integrated database retrieval system