Phocoena sinus (vaquita): 116754094
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Entry
116754094 CDS
T07759
Symbol
ABRAXAS1
Name
(RefSeq) BRCA1-A complex subunit Abraxas 1 isoform X1
KO
K20774
BRCA1-A complex subunit Abraxas
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
116754094 (ABRAXAS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psiu03400
]
116754094 (ABRAXAS1)
DNA repair and recombination proteins [BR:
psiu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
116754094 (ABRAXAS1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MPN_2A_DUB_like
Zw10_N
PRC2_HTH_1
DUF3461
DUF2096_N
CENP-Q
Motif
Other DBs
NCBI-GeneID:
116754094
NCBI-ProteinID:
XP_032488147
Ensembl:
ENSPSNG00000003150
UniProt:
A0A8C9DXM4
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Position
5:complement(99602584..99631684)
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AA seq
410 aa
AA seq
DB search
MEGESTSAVLSGFVLGALVFQHLNTDSDTEGFLLGEVKGEAKNSITDSQMDDFEVIYTID
IQKYVSCYQLFSFYNSSGEVNERALKKILSSVKKDVVGWYKFRRHSDQIMTFRERLLHRN
LQQHLSSQELVFLLLTPSIITESCSTHRLEHALYKPQKGLFHRIPLVVANLGMSEQLGYK
TVSDSCMSTGFSRAVKTHSSKFFKEDGSLKEVHKINELYASLQEELKSICSKVEHSERAV
EKLLKDINRLKREIKKRKQAQIQATREKNVQKHPQENIFLCQALQTFFPDCEFLHSCVIS
LKNRHISKSSCNTNHHLNVVDNLTLMVEYTDIPEASPAGSALQMIKRKASGTDGGWQFKK
SRLLEIQNQPSKTDTDSSNQEKASTVSSPETDEEIEKMNGSGEYPQSPTF
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgagagcacgtcggcggtgctctctggctttgtgctgggcgcgcttgtcttc
cagcacctcaacaccgactcagacacggaaggttttctccttggggaagtgaaaggtgaa
gcgaagaacagcataactgattctcaaatggatgattttgaagttatttatacaattgac
attcagaagtacgtttcatgctatcagctttttagcttttataattcttctggtgaagta
aatgagcgagcactgaagaaaatattatcaagtgtcaaaaaggatgtggttggttggtat
aaattccgacgtcattcagaccagatcatgacattcagagagagactgcttcacagaaac
ttacagcagcatctttcaagccaggaacttgtttttctgttattaacaccgagtataata
acagaaagctgctctactcatcggctggagcatgccttatataaacctcagaaagggctt
tttcataggatacctttagtggtggccaatttgggcatgtctgaacaactgggttataaa
actgtatctgattcctgtatgtccactggttttagtcgagcagtaaaaacacacagctct
aaattttttaaagaagatggatctttaaaggaggtacataagataaatgaactgtatgct
tctttacaagaggaattaaagagtatatgcagtaaagtagaacacagtgagagagcagta
gagaaactactaaaagatataaacagattaaaacgagaaattaaaaaaagaaagcaagca
cagattcaagcaacacgagagaagaatgtccagaaacaccctcaggagaacatttttctt
tgtcaagctttacagaccttttttcccgattgtgaatttcttcattcatgtgttatctcc
ttgaaaaatagacatatttctaaaagtagttgtaataccaaccaccatctcaatgtggta
gacaacctgaccctaatggtggaatatactgacattcctgaagctagtccagctggtagt
gcgctgcaaatgattaagcgtaaagcttcaggtacagatggtggatggcaattcaagaag
tcacggctgttagagatacagaaccaaccatctaaaacagatactgatagtagtaaccaa
gaaaaggcatccacagtgagcagcccagaaacagatgaagagattgagaaaatgaacggt
tctggtgaatatccacagtctcctaccttttga
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