Phocoena sinus (vaquita): 116754137
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Entry
116754137 CDS
T07759
Symbol
GABRB1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04080
Neuroactive ligand-receptor interaction
psiu04082
Neuroactive ligand signaling
psiu04723
Retrograde endocannabinoid signaling
psiu04726
Serotonergic synapse
psiu04727
GABAergic synapse
psiu05032
Morphine addiction
psiu05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116754137 (GABRB1)
04082 Neuroactive ligand signaling
116754137 (GABRB1)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
116754137 (GABRB1)
04726 Serotonergic synapse
116754137 (GABRB1)
04723 Retrograde endocannabinoid signaling
116754137 (GABRB1)
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
116754137 (GABRB1)
05033 Nicotine addiction
116754137 (GABRB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psiu04040
]
116754137 (GABRB1)
Ion channels [BR:
psiu04040
]
Ligand-gated channels
GABA-A
116754137 (GABRB1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
116754137
NCBI-ProteinID:
XP_032488273
Ensembl:
ENSPSNG00000003559
UniProt:
A0A8C9B8C5
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Position
5:71234335..71623406
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AA seq
474 aa
AA seq
DB search
MWTVQNRESLGLLSFPVMIAMVCCAHSANEPSNMSYVKETVDRLLKGYDIRLRPDFGGPP
VDVGMRIDVASIDMVSEVNMDYTLTMYFQQSWKDKRLSYSGIPLNLTLDNRVADQLWVPD
TYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIEFYWNGGEGAVTGVNKIELPQFSIVDYKMVSKKVEFTTGAYPRLSLSFRLK
RNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKI
PYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQKKGAGKQDQSANEKNKLEMNKVQ
VDAHGNILLSTLEIRNETSGSEVLTGGSDPKATMYSYDSASIQYRKPLSSREAYGRALDR
HGAHSKGRLRRRASQLKVKIPDLTDVNSIDKWSRMFFPITFSLFNVVYWLYYVH
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtggacagtacaaaaccgagagagtttggggcttctctctttccctgtgatgattgcc
atggtctgttgtgcacacagcgccaatgagcccagcaacatgtcatacgtgaaagagaca
gtggatagattgctcaaaggttatgacattcgcttgcggccggactttggagggcccccc
gtggacgtcgggatgaggatcgatgtcgccagcatagacatggtctccgaagtgaacatg
gattatacactcaccatgtatttccagcagtcttggaaagacaaaaggctttcttattct
ggaatcccactaaacctcacgctagacaacagggtagctgaccaactctgggtaccagac
acctactttctgaatgacaagaaatcatttgtgcatggggttacagtgaaaaatcgaatg
atccgactgcatcctgatggaacagttctctacggactccggatcacaaccacagctgcg
tgtatgatggatctacgaagataccctctggatgaacaaaactgcaccctggagattgaa
agttatggctacaccacggatgacattgagttttactggaatggaggagaaggagcagta
acaggagtgaataaaattgagcttcctcagttttcaattgttgactataagatggtgtcc
aagaaggtggagttcacaacaggggcctatccacgactgtcactaagttttcgtctaaag
agaaacattggttacttcattttgcaaacctacatgccttccacactgattacaattctg
tcctgggtgtcgttttggatcaactatgatgcctctgcagccagagtcgcactaggaatc
accacagtgctgacaatgacaaccatcagcactcacctcagggagaccctgccaaagatc
ccttacgtcaaagcaatcgatatttacctgatgggttgctttgtgttcgtgttcctggct
ttgctggaatatgcctttgtaaattacatcttctttggaaaaggccctcagaaaaaagga
gctggcaaacaagaccagagcgctaatgagaagaacaaactggagatgaataaagtccag
gtggacgcccacggcaacattctcctcagcaccctggagatcaggaacgagactagcggc
tcggaagtgctcacgggcgggagcgaccccaaggccaccatgtactcgtacgacagcgcc
agcatccagtaccgcaagccgctgagcagccgcgaggcgtacgggcgcgcgctggaccgg
cacggcgcccacagcaaggggcgcctccgcaggcgcgcctcgcagctcaaagtcaaaatc
cccgacttgactgatgtgaattccatagacaagtggtcccgaatgttcttccccatcacc
ttttctctttttaacgtcgtttattggctttactatgtacactaa
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