KEGG   Phocoena sinus (vaquita): 116754142
Entry
116754142         CDS       T07759                                 
Symbol
RNF4
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4 isoform X1
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
psiu  Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:psiu04121]
    116754142 (RNF4)
Enzymes [BR:psiu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     116754142 (RNF4)
Ubiquitin system [BR:psiu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    116754142 (RNF4)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 Prok-RING_4 zf-UDP zf-RING_4 zf-rbx1 zf-C3HC4_4 zf_RING_Vps8 Rtf2 TerY_C zf-RING_16 zf-RING_11 TRAF3_RING IBR_1 Sina_RING zf-RING_6 zf-RING_10 zf-P11 zf-RING_Vps41 DZR
Other DBs
NCBI-GeneID: 116754142
NCBI-ProteinID: XP_032488283
Ensembl: ENSPSNG00000020234
LinkDB
Position
5:1576850..1618157
AA seq 216 aa
MSTVSFRKRRGGTVNSRQAQKRTREASSPPEMALEAEPIELVESAGDEIVDLTCESLEPV
VVDLTHSDSVVISITRALLDLSKNQLLALWILSLIVEERRRPRRNGRRLRQEHADSCVLS
SDDEELPRDKDVYVTTHTPRNAREEAATGLRPSGTVSCPICMDGYSEIVQNGRLIVSTEC
GHVFCSQCLRDSLKNANTCPTCRKKISHKRYHPIYL
NT seq 651 nt   +upstreamnt  +downstreamnt
atgagtacggtgagttttagaaagcgtcgtggaggaacagtaaattctagacaagcccag
aagcgaactcgagaagcatcctccccccctgagatggccctggaggcagaacccatagaa
cttgtggaaagcgctggagatgaaatagtggacctcacctgtgaatctttagagcctgtg
gtcgtcgacctgactcacagcgactctgtcgtgattagtatcaccagagctttattagat
ctttcaaagaaccaacttttagctttgtggatcctttctcttattgttgaagaaaggagg
cggccaaggaggaacggcaggaggctgcgccaggagcatgccgacagctgtgtgctgagc
agtgatgacgaggagctgcccagggacaaggacgtgtatgtgaccacccacacccccaga
aatgcccgggaggaggccgctaccggactcaggccctctggtactgtcagttgtcccatc
tgcatggacgggtactcggagattgtgcagaatggacgtctcattgtttctacagaatgt
ggccacgtcttctgtagccagtgcctccgtgattcccttaagaatgctaacacttgccca
acttgcaggaaaaagatcagccacaagcggtaccaccccatttatttatga

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