Phocoena sinus (vaquita): 116754221
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Entry
116754221 CDS
T07759
Symbol
YTHDC1
Name
(RefSeq) YTH domain-containing protein 1 isoform X1
KO
K20100
YTH domain-containing protein 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psiu03041
]
116754221 (YTHDC1)
Spliceosome [BR:
psiu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116754221 (YTHDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
Fyv8
Motif
Other DBs
NCBI-GeneID:
116754221
NCBI-ProteinID:
XP_032488536
Ensembl:
ENSPSNG00000004070
UniProt:
A0A8C9DY81
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Position
5:87690552..87725378
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AA seq
737 aa
AA seq
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MAADSREEKDGELNVLDDILTEVPEQDDELYNPESEQDKNEKKGSKRKSDRMESTDTKRQ
KPSVHSRQLISKPLSSSVSNNKRMVSTKGKSVTEYKNEEYQRSERNKRLEADRKIRLSSS
ASREPYKSQSEKTCLRKRDPERRVKSPTPDGSERIGLEVDRRASRSSQSSKEEVNSEEYG
SDHETGSSGSSDEQGNNTENEEEGAEDVEEDEEVEDAEEDEEVDDDGEEEEEEEEEEEEE
EEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSDSESVSFTDGSVRSGSGTDGSDEKK
KERKRARGISPIVFDRSGSSASESYAGSEKKHEKLSSSVRAVRKDQTSKLKYVLQDARFF
LIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFARLSSE
SHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIGRDGQ
EIELECGTQLCLLFPPDESIDLYQVIHKMRHKRRMHSQPRSRGRPSRREPVRDVGRRRPE
DYDIHNSRKKPRIDYAPEFHQRPGYLKDPRYQEVDSFTNLIPNRRFSGVRRDVFLNGSYN
DYVREFHNMGPPPPWQGMTPYPGMEQPPHHPYYQHHAPPPQAHPPYSGHHPVPHEARYRD
KRVHDYDMRVDDFLRRTQAVVSGRRSRPRERDRERERDRPRDNRRDRERDRGRDRERERE
RLCDRDRDRGERGRYRR
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgacagccgagaggagaaagatggagaacttaatgttctagatgatattttg
actgaagtaccagaacaggacgatgaactctataatccagagagtgaacaagataaaaat
gagaaaaagggttcaaaaagaaaaagtgaccgaatggaatctactgacacaaagcgacaa
aagccttctgttcattcaagacaattgatttctaagccactgagctcatcagttagcaat
aacaaaagaatggttagtacaaaaggaaagtcagtcacagagtataaaaatgaggaatat
caacgatctgaaagaaacaaacgtctagaagctgatcggaagattcgtttgtcaagtagt
gcctccagagaaccttataagagtcaatctgagaaaacatgtctgcggaagagggatcct
gaaaggagggtcaaatcccctacaccagatggttctgagagaattgggcttgaagtggat
agacgtgcaagcagatccagccaatcttccaaggaggaagtgaactctgaagaatatggc
tctgaccatgagactggcagcagtggttcttctgatgagcaaggcaacaatactgagaat
gaggaggaaggggcggaagatgtggaggaagatgaagaagtagaagatgcagaggaagat
gaagaggtggatgacgatggagaggaggaagaggaggaagaagaagaggaagaggaggag
gaggaggaagaggaggaggaggaagaagaagaatatgaacaggatgagagagaccagaag
gaagagggaaatgattatgacacccggagtgaggctagcgactccgattctgaatctgtt
tccttcacggatgggtctgtcagatctggttcaggaacagatggatcagatgagaaaaag
aaggaaaggaagagagctagaggcatatctcctattgtttttgatagaagtggaagctct
gcatcagagtcatatgcaggttcagaaaagaagcatgagaaattatcatcttccgttcgt
gctgtccgaaaagatcaaaccagtaaactcaaatatgtcctacaggatgcgagatttttt
ctcataaagagtaacaaccatgagaatgtgtcccttgccaaagctaagggtgtatggtct
acactgccagtaaatgagaagaaattaaatgctgcattcagatctgcaaggagtgttatc
ttaatattttctgtgagagagagtggaaaatttcaaggatttgcaagactttcttcagaa
tcacaccatggaggatctcctatacattgggtacttccagcaggaatgaatgctaaaatg
ctgggaggcgtctttaaaattgactggatttgcaggcgtgaattacccttcactaagtcg
gctcatctcaccaatccttggaatgaacataagccagtaaagatcggacgtgatggacag
gaaattgaacttgaatgtggaacccagctttgtcttctatttccccctgatgaaagtatt
gacttgtatcaggtcattcataaaatgcgtcacaagagaagaatgcattctcagccccgg
tcaagaggacgtccatcccgtcgagaaccagtccgggatgtgggaaggcgtcgaccagaa
gattatgatattcataacagcagaaagaaaccaaggattgactatgcccctgagtttcat
cagagaccagggtatttaaaggatccacgataccaggaagtagatagtttcacaaatctt
attcccaacagacggttttcaggagttcgccgagatgtgtttttaaatgggtcctacaat
gattatgtgagggaatttcataacatgggaccaccaccaccttggcaaggaatgactcct
tatcctggaatggaacaacctccacaccatccttactatcagcaccatgctccacctcct
caagctcatcccccctactcaggacatcacccagtaccacatgaagcaagatacagagat
aaacgagtacatgattatgatatgagggtggatgatttccttcgtcgaacacaagctgtt
gtcagtggtcggagaagtagacctcgtgaaagagatcgggagcgagagcgagaccgccct
agagataacagaagagacagagaacgagatagaggacgtgatagagaaagagaaagagag
cgattatgtgatcgggacagagaccgaggggagagaggtcgatatagaagataa
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