Phocoena sinus (vaquita): 116754263
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Entry
116754263 CDS
T07759
Symbol
GABRA4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04080
Neuroactive ligand-receptor interaction
psiu04082
Neuroactive ligand signaling
psiu04723
Retrograde endocannabinoid signaling
psiu04727
GABAergic synapse
psiu04742
Taste transduction
psiu05032
Morphine addiction
psiu05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116754263 (GABRA4)
04082 Neuroactive ligand signaling
116754263 (GABRA4)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
116754263 (GABRA4)
04723 Retrograde endocannabinoid signaling
116754263 (GABRA4)
09157 Sensory system
04742 Taste transduction
116754263 (GABRA4)
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
116754263 (GABRA4)
05033 Nicotine addiction
116754263 (GABRA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psiu04040
]
116754263 (GABRA4)
Ion channels [BR:
psiu04040
]
Ligand-gated channels
GABA-A
116754263 (GABRA4)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
116754263
NCBI-ProteinID:
XP_032488632
Ensembl:
ENSPSNG00000003529
UniProt:
A0A8C9BEE3
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Position
5:complement(71131896..71196132)
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AA seq
555 aa
AA seq
DB search
MVSAKKVPAIATSFGASFALLHFLCLAACLNESPGQNQKEERLCPENFTRILDSLLDGYD
NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWIDKRLKYDGPIEILRLN
NMMVTKVWTPDTFFRNGKKSVSHNMTAPNKLFRIMRNGTILYTMRLTISAECPMRLVDFP
MDGHACPLKFGSYAYPKSEMIYTWTKGPEKSVEVPKESSSLVQYDLIGQTVSSETIKSIT
GEYIVMTVYFHLRRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNVQMAKAKRKTSKAPQ
EIPAAPVLREKQPEAPLQNSNANLNMRKRANALVHSESDVGNRTEVGNHSSKSSTVVQGS
SEATAQSYLASSPNPFSHANAAETISAARAIPPAYPSPPSRTGYVPRKVPVGSASAQHVF
GSRLERIKTTVNSIGASGKLSATTAPSAPPPSGSGTSKIDKYARILFPVTFGAFNMVYWV
VYLSKDTMEKSESLM
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaagaaggtacccgcgatcgcgacgtccttcggggccagtttcgccctc
ctgcacttcctgtgcctggcggcttgtttaaacgaatccccaggacagaaccaaaaggag
gagagattatgcccggaaaattttacccgcatcctggacagtttactcgatggttatgac
aacaggctgcgtcctggatttgggggtcctgttacagaagtgaaaactgacatatatgtc
actagctttggacctgtttctgatgttgaaatggaatacacaatggatgtgttcttcaga
cagacatggattgacaaaagactgaaatatgatggccccattgaaattctgagattgaac
aatatgatggtaacaaaagtatggactcctgatactttcttcaggaatggaaagaaatct
gtctcacataatatgacagctccaaataagctttttagaattatgagaaatggcactatt
ttatacacaatgagactcaccataagtgcagagtgtcccatgagattggtggatttcccc
atggatggtcatgcatgccctttgaaatttgggagttatgcctatccgaagagtgagatg
atttatacgtggacaaaaggtcctgagaaatcagtagaagttccaaaggagtcttccagc
ttagttcagtatgacttgattgggcaaactgtatcaagtgaaactatcaaatccatcacg
ggtgaatatatcgttatgacggtttattttcacctcagacggaagatgggttattttatg
attcagacgtacattccatgtattatgacagtaattctttctcaagtttcattctggata
aataaggaatcagttccagctaggactgtattcggaataaccacagtgctcaccatgacc
acactgagcatcagtgcacggcattctttgcccaaagtgtcctatgcgactgccatggat
tggttcatagctgtctgctttgcttttgtgttttcggcccttattgagtttgctgctgtc
aactactttaccaatgttcaaatggcaaaagccaaaaggaagacatcaaaagccccccag
gaaattccagctgctccagtgctgagagaaaagcaacctgaagcacctctgcagaactca
aatgccaatctgaacatgagaaaaagagccaatgccttggttcactctgaatctgatgtt
ggcaacagaactgaggtgggaaaccattcgagcaagtcttccacggttgttcaaggatct
tctgaagccacagcacagtcttacttagcttccagtccaaacccattcagccatgcaaat
gcagctgaaactatatccgccgcaagagcaattccacctgcttatccttctccacctagt
agaactgggtacgtgccccgaaaagttccagttggatctgcttctgcccagcatgtgttt
ggatcaagactggagcgaattaagaccacagttaatagcataggggcttctgggaagttg
tcagccactactgctccctcggctccaccaccttctggatctggcacaagtaaaatagac
aaatatgcccgcattctctttccagtaacatttggggcttttaatatggtctattgggtt
gtttacttatctaaggacactatggagaaatcagaaagtctaatgtaa
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