Phocoena sinus (vaquita): 116754273
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Entry
116754273 CDS
T07759
Symbol
SCLT1
Name
(RefSeq) sodium channel and clathrin linker 1 isoform X1
KO
K25400
sodium channel and clathrin linker 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psiu03037
]
116754273 (SCLT1)
Cilium and associated proteins [BR:
psiu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116754273 (SCLT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCCAP
AP5B1_barrel
Ig_J
Motif
Other DBs
NCBI-GeneID:
116754273
NCBI-ProteinID:
XP_032488651
Ensembl:
ENSPSNG00000002991
LinkDB
All DBs
Position
5:13141935..13402444
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AA seq
706 aa
AA seq
DB search
MATEIDFLRDQNQRLNEVLRRYQMENCFKYSSIQKSVFKGVAGDTVENSVVDQSFLVPLI
TEYDKHLEELNGQLKYYQKQMGEMKLQLENVIKENERLHRELKDAVEKQLEAIPFGTEMG
NEICTDDETVRNLQEQLQLANQEKTQAVELWQTVSQELDRLQKLYQEHMTEAQIHVVESQ
KQKDQLTSFQQLTKQLHVTNETTEMTNQHFLKTVTEQNVEIEQLRKQLRQAKLDLRVAAA
KVEELTKVTEDLQGQMQKKEEDMVSAQGREEASDRRLQQLQSSIKQSETRLCVTIQEATQ
LRAEKIHLEKQTRDLQAKCYELENEKYEAIVRARNSMQLLEEANLQKNQALLEEKQKEED
IEKMKETVSRLVQDAAIRTRKEVANTRKQYNVQISRLTEELSALQMECAEKQGQIERGIR
EKKAVEEELEKIYLEGRINENDYRKLEEMHQRCLVAERSKDDLQLRLKTAENKIKQLEIN
SSEEISRCQEMIQKLQNVLESERENCGFVSEQRLKLQQENEQLQKQTEDLRKIALEAQKK
AKLKISTMEHEFSIKEHGFEVQLREMEDSNRNSTVELRHLLATQQKAACRWKEEMKKLTE
SAEIRISSLKSELSRQKLHTQELLSQLEMANEKVVENEKLIVEHQEKSNRLQKRLSEAEQ
RAASASQQGLIFNEVKAFKQKSPTPGTGPHSRSSVRLQYREEKQPP
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggccacagaaatcgactttctgcgagatcagaatcaaaggctaaatgaagttcttaga
cggtatcaaatggaaaattgtttcaaatattcatcgatacagaaatctgtcttcaaagga
gttgcaggtgacacagtagaaaactcagtagttgaccaaagctttttagttcctcttatt
actgagtatgataagcatctggaagagctaaatgggcagctgaaatattatcagaaacag
atgggtgagatgaaactacagcttgaaaatgtcatcaaggaaaatgaaaggttgcaccgt
gaattaaaagatgctgttgaaaagcaattggaagccattccctttggcacagagatggga
aatgagatatgtacagatgatgaaacagtcaggaatcttcaagaacaactacaactggcc
aatcaagaaaaaactcaggctgtagaactctggcagactgtttctcaggagctggacaga
ctacagaaactttaccaggaacatatgactgaggcccagattcatgtagttgaaagtcaa
aaacaaaaggatcagctgaccagttttcaacaactgaccaagcaacttcatgtaactaat
gagaccacagaaatgactaatcaacactttttgaaaacagtaactgaacaaaatgtggaa
atcgagcaactccgaaaacaactaaggcaagccaagttagatctgagagttgcagcagca
aaagtggaagagttaactaaagtgacggaagatcttcaaggacagatgcaaaagaaggag
gaggatatggtgtctgcccaaggaagagaggaagcatcagataggcgcttacagcaatta
caatctagtataaaacaatcagaaacaaggttatgtgtgacgatccaagaagctacccaa
ttaagagcagaaaaaatacatttggaaaaacagaccagagacttacaagcaaagtgctat
gaattagaaaatgagaaatacgaagctattgtaagagccagaaatagcatgcaactccta
gaagaagctaaccttcaaaaaaatcaggctctgcttgaggagaagcaaaaagaagaagat
atagagaaaatgaaagaaacagtttctcggcttgtgcaagatgctgccataagaaccagg
aaggaagttgcaaacacaagaaaacaatataatgtacagatttctcgactaacagaagaa
ctttcagcccttcaaatggagtgtgctgaaaaacaaggccaaattgaacgaggcattagg
gagaaaaaagcagtggaagaagaactagaaaagatttaccttgaaggcagaataaatgaa
aatgattacagaaaactagaagaaatgcaccaaagatgcctggttgccgaacgttcaaaa
gatgatcttcagctaagacttaagacagcagaaaataaaatcaaacaacttgaaataaat
tcctcggaagagatatcacgttgccaagaaatgattcagaaacttcaaaatgtattggag
tctgagagagagaactgtggatttgtcagtgaacaaaggctgaaacttcagcaggaaaat
gaacagttacagaaacagactgaggatttaagaaagattgctctcgaggctcaaaaaaaa
gccaaattaaagatcagtacgatggagcatgaattttcaataaaggaacatgggtttgaa
gttcagttaagagagatggaagacagtaatcgaaattccacggttgaactgaggcatctc
ttagcaactcagcagaaggcagcctgtaggtggaaagaagaaatgaagaaactcactgag
agtgcggaaattagaatcagtagtctaaagagtgagctgagtcgacagaaacttcatacc
caagagctgctttctcagctggaaatggcaaatgaaaaggtagttgagaatgaaaagttg
attgtagagcatcaagaaaaatccaacagacttcagaaacgactaagtgaggcggaacag
agagctgcttcagcctcccagcagggcttgatatttaatgaagtaaaggcgtttaaacag
aaatccccaacccctggaaccgggccacacagcaggagctcagtgcgattacagtacaga
gaagaaaagcagcctccatga
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