Phocoena sinus (vaquita): 116754283
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Entry
116754283 CDS
T07759
Symbol
ZFYVE28
Name
(RefSeq) lateral signaling target protein 2 homolog isoform X1
KO
K24780
lateral signaling target protein 2
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116754283 (ZFYVE28)
Membrane trafficking [BR:
psiu04131
]
Endosome - Lysosome transport
Others
Others
116754283 (ZFYVE28)
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Gene cluster
GFIT
Motif
Pfam:
FYVE
FYVE_CARP1-2
MmeI_hel
FYVE_2
Motif
Other DBs
NCBI-GeneID:
116754283
NCBI-ProteinID:
XP_032488673
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Position
5:complement(1419874..1483205)
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AA seq
822 aa
AA seq
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MDVCIPQDRAPRDFCVKFPEEIRHDNLAGQLWFGAECLAAGSIIMNRELESMAMRPLAKE
LTRSLEDVRGALRDQALRDLNTYTEKMREALRHFDVLFAEFELSYVSAMVPVKSPREYYV
QQEVIVLFCETVERALDFGYLTQDMIDDYEPALMFTIPRLAIVCGLVVYADGPLNLDRKA
EDMSELFRPFHTLLRKIRDLLRTLTEEELHTLERNLCISQDVEFPIRADTPVPPALEPAL
PAPLGPAEPRHAEAELACSVQDDDQELEQLSRMVHRAGDAMSSLLSPPNACQSPAHGPGA
ERGALGQASPGGPRLPPGSDEEEGRVFFMEDVDGAAEPPGGRCGRAGGPQERGRGGESRG
AGAGAAAAAEPEDLSGSSGVQGDQTRAVGPGSCNCPDFQPQLDGWEASAEDAQTAELIAH
RTGGMKLSATVIFNPKSPSSLDSALANPEVLGNGVSPGEPAAEGTEGGPHKLSATAANSL
LNSCVCCRGCAGSREDAAESLRGKCGSGSVIRSCYVGSAKACAKGSAAGLLEVRPAPEAL
PTALGVPDPGPSEDAPGGQEPKAPTSDKCLAHTSGPQVDAADGLPGGGGGASEQKEAEAR
QPSEAGEESRRGGAAGEEAQHLPGSSGFTAGSCPSDEMGPDAGPVAIREKIRSRFHGSHD
LIHRLFVCISGVADQLQTNYASDLRSILKTLFQVMATKPETDDKEKLKKVTQTLRSAALE
DCALCQETLSSSDLAAKTRDGDLEDPPEWVPDEACGFCTACKAPFTVIRRKHHCRSCGKI
FCSRCSSHSAPLPRYGQVKPVRVCTHCYMFHVTPFYSDKAGI
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgtgcatcccccaggaccgcgccccacgggatttctgtgtcaagttccccgag
gagatccggcacgacaacctggccggccagctctggtttggcgccgagtgccttgccgct
ggctccatcatcatgaaccgcgagctggagagcatggccatgcggccgctggccaaggag
ctgacccgcagcctggaggacgtgcgcggcgccctccgcgaccaggcgctgcgggacctc
aacacctacacggagaagatgcgggaggcgctgaggcacttcgacgtgctgttcgccgag
ttcgagctgagctacgtgtcggccatggtgcccgtgaagtccccgcgggagtactacgtg
cagcaggaggtcatcgtgctgttctgtgagacggtggagagggccctggacttcgggtac
ctgacccaggacatgattgatgactacgagccagccctcatgttcaccatccccaggttg
gccatcgtgtgtggcctcgtggtctatgcggatggacccctgaacctggaccgcaaggca
gaggacatgtccgagctcttccggcccttccacacgttgctgcggaaaatcagggatttg
ctgcggaccctgaccgaggaggagcttcacacgctggaacggaacctctgtatttcccaa
gacgtggagttccccatccgggcggacaccccggtgccccctgccctggagcccgccctg
cccgcacccctcggcccggcggagcccaggcacgcagaggcggagctggcgtgctccgtg
caggacgacgaccaggagctggagcagctcagccgcatggtgcacagggctggggacgcg
atgtcctctctcctgtccccgcccaatgcctgccagtcccccgcgcacgggccgggcgcc
gagcgcggtgccctcgggcaggcatccccgggcggaccacggctgccgccgggcagcgac
gaggaggaggggagggtgttcttcatggaggatgtggacggggcggcagagcccccgggc
ggccggtgtgggcgggcgggcggcccccaggagagagggcggggcggggagagccgaggg
gcgggggccggagcagccgccgcggccgagccggaggacctgagcggcagcagcggcgtg
cagggcgaccagacgcgggcagtgggccctggctcctgcaactgcccggacttccagccg
cagctggatggctgggaggcgagtgcggaggacgcccagacggccgagctgatcgcccac
cggacggggggcatgaagctctcggccacggtcatcttcaaccccaagtcgcccagctcc
ctggactctgccctcgccaacccagaagtcctgggaaacggcgtctccccgggggagccg
gcggccgaggggacggagggcggcccccacaaactcagcgccacggccgccaacagcctt
ctgaactcctgcgtgtgctgtaggggctgcgcgggcagcagggaggacgcggcggagagc
ctgcgcggcaagtgcggctcgggaagcgtcatccgctcctgttacgtgggctccgccaag
gcctgcgccaagggctcggccgcgggactgctggaggtccggcccgccccggaggccttg
cccacggcgctgggcgtcccagaccccgggccctccgaagacgcccccggcgggcaggag
cccaaagcccccacttccgacaagtgcctggcacacacctcagggccccaggtggacgcg
gcagacgggctgcctggagggggcggcggagcgagtgagcaaaaggaggctgaggcccgg
cagccctcggaggccggggaggagagtcggcgtggaggggcggccggggaggaggcccag
cacctgccgggctccagcggcttcacggccggctcctgcccctcagacgagatggggccg
gacgcaggccccgtggccatcagagagaagatccggtcccggttccacggcagccacgac
ctgatccaccgcctgtttgtctgcatttcaggcgtggccgaccagctgcagaccaactat
gccagcgacctcagaagtattctcaagaccctcttccaggtcatggccaccaagccggaa
acggacgacaaggaaaagctaaagaaggtcacccagaccctgcggagcgcagccttggag
gactgcgctctgtgccaggagaccctgtcgtcctccgatctcgcagccaagacccgagat
ggagacttggaagacccgcccgagtgggtcccggacgaggcctgcggcttctgcaccgcg
tgcaaagcccccttcaccgtcatccgcaggaagcaccactgccggagctgtgggaagatc
ttctgctcccgctgctcttcgcactcggcaccgctgccccgctacgggcaggtgaagccc
gtccgcgtgtgcacgcactgctacatgttccacgtcacgcccttctacagcgacaaggcg
ggcatctga
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