Phocoena sinus (vaquita): 116754287
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Entry
116754287 CDS
T07759
Symbol
LRIT3
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
116754287 (LRIT3)
Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
116754287 (LRIT3)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
Ig_3
I-set
Ig_2
LRR_1
LRR_14
LRR_5
fn3
V-set
LRR_9
ig
C2-set_2
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
116754287
NCBI-ProteinID:
XP_032488686
Ensembl:
ENSPSNG00000005437
LinkDB
All DBs
Position
5:complement(30361673..30387074)
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AA seq
672 aa
AA seq
DB search
MRLFASLCIALGFLERVSCSCPSQCTCDYHGRNDGMRSRSVLCSDLDMNEVPTNFPVDTV
KLRIEKTVVHRIPAEAFYYLVELQYLWLTYNSVASLDTSSFYNLKQLHELRLDGNSLAAF
PWTSLRDMPRLRTLDLHNNRITSVPNEAVTYLKNLAYLDLSSNRLTTLPPDFLESWSHLV
TTSSRSLDLSARRIILGLQDNPWFCDCHISKIMALSKVADPVVVLLDPLMVCSEPERLTG
ISFQRAELQQCLKPSVMTSATQITSALGSNVLLRCDTTGYPTPQLTWTRPDSSPVNYTVI
QESPEEGVRWSIISLTGISYMDAGDYKCKAKNLAGMSEAVVTVTVVGVVMTTVSSETSER
RTGDHPEQEVQLGSRTSATLPGSSSSPWPYSSSSSFPASSTFLPTSTSSPPSTASFSSSP
FFSSIVSSATTPSTRISTSTTMASRQSLHPDGKRNVKVEMGSGKLPPASASKREELPLLD
QALPMETNATIENLQVVSETEESVILMWNTINTTQNLEVTVLYSKYGEKDLLLLNADSSK
NQVTISGLLPGWQYIACVCPKGMPPQKDQCITFSTDRVEEEGDSQGSFLMVVSGAACVVV
LPLIFFLLYKVCKLQCKSDSLWEDDLAKETYIQFETLSPRSQSVGELWTRRPRDDSEKLL
LCSKSSVESHDF
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctctttgcaagtctgtgcattgcgcttggctttttggaaagagtgagctgttcg
tgtccttcacagtgcacctgtgattaccatggcagaaatgacggcatgagatcaaggtct
gtgctatgtagtgacctggatatgaacgaggtacctacaaacttccccgtggacactgtg
aagcttcgcatagagaagaccgttgtccataggatccccgccgaggccttctactacctg
gtggagctccagtacctctggttgacctataattctgtggccagccttgacaccagcagc
ttttacaacctaaagcagctgcacgagttgcgcttggatggaaattctctggctgctttc
ccttggacatctctgagggacatgcctcgtctgaggaccctggatttgcacaataacaga
ataaccagtgtgccaaacgaggcggtgacgtatctgaagaaccttgcctacttggattta
tcaagcaacagattaaccacactgccgccagatttcctggagagctggtcccacttagtt
acaacatcatccagaagcctggacctttcagcaagaagaattattcttggcctgcaggac
aacccgtggttctgtgactgtcacatttccaaaataatggcattgtcaaaagttgctgac
cctgtggtagtgcttcttgatccactgatggtttgtagtgaaccggaacgcctcacaggg
atttcgtttcagcgggctgagctgcagcagtgtctgaagccatcagtgatgacctcggcc
acccagatcacctctgctctgggcagtaatgttctgctgcggtgtgataccactggctac
cctaccccgcagctcacctggaccagaccagatagctcgccagttaattatacagtaatt
caggaatctccagaggagggagtcagatggtccataataagcttgacaggcatttcttac
atggatgctggggattacaaatgtaaggccaaaaatttggctgggatgtcagaagctgtg
gttactgtgacagtggttggtgttgttatgaccaccgtatcatcagaaacttctgaaaga
agaactggggatcaccctgagcaagaggtccagctgggatctagaacatctgcaactcta
cctggttcatcatcgtctccctggccttattcctcctcttcttccttcccagcttcttcc
acttttcttcctacttctacttcatcgcctccctccactgcttccttctcctcatctcct
ttcttctcctccattgtttcttcagccacaactccaagcactagaatatctacaagcact
accatggccagccgtcagtcactccacccagatgggaaaagaaatgtcaaggtggagatg
ggtagcggtaagcttcccccagctagtgcaagtaaaagagaagagttgccattgttggat
caagccctgccgatggaaacgaatgccacaatagaaaatctccaggtagtcagcgaaacc
gaagaaagcgtgatcttgatgtggaacaccattaacaccacgcagaatttggaagtgact
gtgttgtattccaagtatggtgagaaggacctgctactgcttaatgcagactccagcaag
aaccaagtcaccataagtggcttgttgcctggttggcaatatatagcatgtgtctgtcca
aaaggaatgcctccccagaaagaccaatgtatcaccttttctactgacagagttgaagaa
gaaggtgattctcaagggtctttccttatggtggtgagtggtgctgcctgtgttgttgtc
ttgccattgatttttttcctgttgtacaaagtttgcaaacttcagtgtaagtcagactcc
ctctgggaagatgatttggcgaaagagacttatatccaatttgaaacgctgtcccccagg
tctcaaagtgtaggggaactttggacgcgaaggcccagagacgattcagaaaaattgctg
ctttgctctaagtcaagtgtggaatctcatgacttttaa
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