Phocoena sinus (vaquita): 116754340
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Entry
116754340 CDS
T07759
Symbol
NWD2
Name
(RefSeq) NACHT and WD repeat domain-containing protein 2
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
116754340 (NWD2)
Domain-containing proteins not elsewhere classified [BR:
psiu04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
116754340 (NWD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
EIF3I
Beta-prop_NWD2_C
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
AAA_16
NPHP3_N
Beta-prop_WDR90_POC16_2nd
NACHT
AAA_22
Beta-prop_NUP159_NUP214
PQQ_2
AAA_28
DUF4062
AAA
NPHP3
B-prop_COPA_B_2nd
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
116754340
NCBI-ProteinID:
XP_032488774
Ensembl:
ENSPSNG00000000639
UniProt:
A0A8C9ATQ1
LinkDB
All DBs
Position
5:63272895..63474531
Genome browser
AA seq
1742 aa
AA seq
DB search
MWPAGAGTKLPCPRDSALRRAAFSGNLTALPSHLMPAGRSVRVFISANPEDTGAERQALR
ENVYPKLREFCRENYGLEFQVIDLYWGIDEEEWDSPELQKTRMKLLEDCLKTSAGPCFVG
LLGEKYGNIRIPGEVEASEFEMILDAAIEAKLETKLLEEWYCRDENSVPAAYYLRPKSEM
LKSNKNAVQPPANAENEKTWQEISDEIKKVFKVAVKLLHEKRKMKHSQARRYLFSALEDE
FDFALGKQTPAFLKKCVCYIRKIANIERFVKIPEMGKYMDITGAEPRIIRDPEAQEKLIK
LRDEFIPTIVASSNLRVYTSVTHCDMKLGYSQEIENHYIEGLGKQFYEDMIDIIQATVQQ
NFDTETDTLYDEILQHSSLCKTYASFYEYKCESLNIVHKYILPSKTGHINPLIIYGGPCT
GKTLLLAEVAKKAYGWLHEDTGPESDPVVVVRFLGTTDMSTDLRTLLLSVCEQLAVNYRC
LVQSYPKKIHDLRDLFINLLNESSLQRPLVVIFDALEQLSESHEARKLWWLPVHLPRFVR
IVLSTLPNKHGILQKLRCLIHEEDNYIELIPRDRKMCSQVLKHQLLRVKRKVTSGQQIYV
NNAFSKCTLPMFVNLTFREVRNWRSHRDVDESSLCVTVHESIEQLFCSLERKCGQKLVSR
ALGYITMAKMGLSEMELEDVLALDNSVMNELNESVRPSNPLRVPYLYIARLKEGLSGYLI
ERHVKNITLLVWANRHLQLIAQKLYLQDNSDLHEMHTILADYFLGVWSGGRRKAFCLEDP
YLNGCLDLESRSLLEEEKHFTEQASFDRQAPDQPWVFQCNPLEPDIFFVNHRKMCELLHH
LTRCGKTDDLLYGIIMNFSWLYTMIKIGQFDKVLLDIELAYNCSQEKELKFLASTLRSIK
TKVVAFPGSLSAELQQRLLPVVSSLPKLRHLLLECDKDGPKYCSIVPLHSSMDVTYSPER
LPLSSSHLHVTEILPTCNPSTVLTALENGSISTWDVETHQLLRQITTAQSVILGMKLTSD
EKYLVVATTNNTLLVYDNVNSCLLSEVEIKGTKHGSGSTYINGFTLSVKHALAWLEASKD
VTVIDLLYGWPLYQFHCWYEVTCVQCSLDGVYAFCGQYLNTTTIFHLGSGEKLCTVTSEF
SGGFVKFLLILDTAQEMVMVDSEGSLSVWNTEDISNPQLTDDFDCRREDSEVVSIELSED
QSAVLICKALSIELLDTSMWKVAEKFRAKHNERFISAVLSKNGDCIIATMENTSAVFFWR
RDTGQCMASLQEISGTIVKLVRSSHHNMLISLSTSGVLSIWDIDIITAMSNIDKTGKPIQ
SLVLPARGEIIYSLDGSDCVHKWNFSSGFLEAVFKHEGIVEHCVLTSSGDVMVTSDDKSS
QYVWHTSSGENLFRINGQRISQLLITHNDQFVVSLCEENASRVWRLATGHRVCNILTTLQ
NAFITSANTFVVGMTKSKVLAVSLWTGSITKKVCCEDGTTIVNFKLIPDCPDIIVFITSA
ETVNIWSLTDEVICRRVQLPNNFLKNLEDFEISPNGKLGIISRGDENINVLDLHSGKLRV
VHASGVIWRHRLSRDGRYLVYICFRNGEEEDENGAISSLIVMRLADGKNIGACSLYKTPT
FLALSQRHLNIIVGFDDGSIGIYTVVDRVDAALKIKIATSNSRQIFNNATQTSRPKCNSY
CFKMSVDCLWRESTEVFARDSPITVSDSMEPNEATPSKKHNSCYDRVCSALESRGHSYAP
DN
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atgtggccggccggcgcgggcaccaagctgccctgtccccgggactctgcgctccggcgg
gcggctttctctgggaacctcaccgccctgccttctcacctgatgccagccggccgcagc
gtccgggtcttcatcagcgccaaccctgaagacacgggagcagaaagacaggcactaaga
gaaaacgtgtatcctaaattaagagaattctgcagagaaaactatggattagaatttcag
gtcatagatctgtactggggaattgatgaagaggaatgggacagccctgagctccagaag
acccgcatgaagctcctggaggattgtttgaaaacttctgcaggtccatgttttgttgga
ctgttaggtgaaaaatatgggaacatccgaatccctggagaagttgaagcatcagagttt
gaaatgattttggatgctgccatagaggcgaagctggagaccaagttactggaagagtgg
tactgtcgggacgagaattcggtgccagcagcttattacctcagacccaaatcggaaatg
ctgaaaagcaataaaaatgcagtgcagccccctgccaatgctgagaatgagaagacctgg
caagagatatcagatgagatcaagaaggtatttaaggttgctgtaaaactgttacatgaa
aagaggaaaatgaaacacagccaagccaggaggtacctgttctcagctctagaggatgag
tttgacttcgctctagggaagcaaactccagcattcctgaagaaatgtgtttgctatatt
aggaaaattgctaacattgagcgtttcgtgaaaatcccagagatgggaaaatacatggat
ataactggagcagaaccaaggattattcgggacccagaagcccaagagaagctgataaaa
ctccgggatgaatttattcctaccattgttgcgtcatctaatctgagagtgtacacatct
gttactcattgtgacatgaaactaggctattcccaagaaatagaaaaccattacatagaa
ggactcggtaaacaattttatgaggacatgattgacataattcaggccacggtacaacag
aattttgacacagaaacggatacactctacgacgaaatccttcagcattcatcactatgt
aaaacgtatgcctccttctacgagtacaaatgtgaatctctaaacattgtgcataaatac
attcttccaagcaaaactgggcacatcaaccctcttattatatacggtggaccatgcact
gggaagacccttctgctagctgaagtagcaaagaaggcttatggctggctgcatgaagac
acgggaccggaatctgacccagtcgtagtcgtgaggtttctaggaaccacagacatgagt
actgatcttaggactctccttctaagtgtctgtgaacagttggccgtgaactaccggtgc
ctggttcagagctaccctaagaagatccatgacctccgcgacttatttataaacctcttg
aatgagtcttcgttgcagagacccctcgtggtcatattcgatgccctggagcagctctca
gagagccacgaggccaggaagctctggtggctcccggttcaccttccccgattcgtccgg
attgtcctctccacgctacccaacaaacatgggatcctacagaaactaaggtgccttatc
cacgaagaagacaactacattgagctgattccccgggacaggaagatgtgcagccaggtg
ctcaaacaccagctgctgcgggtcaaaaggaaggtcacgtcgggccagcagatttacgtg
aacaacgccttctccaagtgcacgttgcccatgtttgtgaacctgacctttagggaggtg
agaaactggcgatctcacagagacgtcgacgaatcctccctctgtgtcaccgtgcacgaa
agcatagagcagctcttctgctccctggagaggaagtgtgggcagaagctcgtctcccgg
gctctaggttacatcaccatggccaaaatgggtttgagtgaaatggagctggaagatgtg
ctggcccttgacaacagtgtgatgaatgagctcaacgagagcgtcaggcccagcaacccc
ctgagggtaccttatctgtacatcgcgaggctcaaggaggggctcagtggatacttaatc
gagagacacgtgaagaacatcaccctcctggtctgggccaacagacacctgcagctcata
gcccagaagctatatctgcaggataacagtgacctgcatgaaatgcataccatcctggca
gactatttcctgggggtctggtcagggggcagaaggaaagctttctgccttgaagacccc
tacctgaatggctgtcttgacttggagagcagaagcctgcttgaggaggaaaagcatttc
acagagcaggcttccttcgacaggcaggccccggaccagccctgggtctttcagtgcaac
ccactggagcctgacatctttttcgtcaaccatcggaaaatgtgtgagctcctgcaccac
ctgacgaggtgtgggaaaaccgatgacctgctctacggcatcatcatgaacttcagctgg
ctttacaccatgatcaaaattggccagtttgacaaggtgctcttggacatcgagctggct
tacaactgctcgcaggagaaggagctgaagttcctggcgagcaccctccgcagcatcaaa
accaaggtcgtcgcgttccccggctccctctctgcagagcttcagcaaagactgctgccc
gtcgtgagttccctgcccaaacttagacaccttcttttagaatgtgacaaagatgggccc
aaatactgctccatcgtgccattacactcatccatggatgtgacctatagcccggagcgt
cttcccttgtcatctagtcacctgcacgtcaccgagattctgcccacctgtaaccccagt
acggtgctcacagctttagaaaacggttccatcagcacgtgggatgtggaaacgcatcaa
ctactcaggcagatcacgacagcccagtctgtcatcctgggcatgaaactcaccagtgac
gaaaagtatctcgtggtggcaacgacaaataacaccttgttggtttacgacaatgtaaat
tcttgcctcctgtctgaagtggaaatcaaagggaccaagcatggaagcggttccacctac
atcaatggatttacactgtccgtcaaacacgctctggcctggctcgaagccagcaaagac
gtcactgtcatcgatctgctctacggatggcccctttaccagttccactgctggtacgaa
gtgacctgtgtccagtgctctctggacggcgtgtatgccttctgtggacagtacctgaac
accactaccatcttccatttagggagtggagaaaagttatgtacggtgacgtctgaattt
tcaggtgggtttgtgaagtttcttcttatcttggacacggctcaggaaatggtaatggta
gacagtgagggaagcctttctgtttggaacactgaggacatctccaacccccagctgacc
gatgactttgactgccgacgagaagatagtgaagtggtcagcattgagctttcagaggac
caaagtgcagttctgatctgtaaagccctcagcatcgagctcttagataccagtatgtgg
aaggtggctgaaaagttcagagcgaagcacaacgaacgctttatatcggctgtgctgtcc
aagaatggagactgcatcattgcgaccatggaaaacacctcggccgtgtttttctggagg
cgggacacgggacagtgtatggcgagcttacaggaaatctcaggtaccatagtcaagttg
gtgagatccagtcatcacaacatgcttatatctttatccaccagtggtgttctttctatc
tgggacatagatataatcacagctatgtccaacatagataagactggaaaacccatccaa
agtctggtgttacctgctaggggggaaatcatttactccctcgatggctctgattgtgtt
cacaagtggaacttcagcagtgggttccttgaagcagtatttaagcatgaaggaatagtt
gaacactgtgtgttgacatcctctggagacgtcatggtgacatcggatgacaagagcagc
caatacgtctggcataccagcagcggtgaaaacctcttccgaattaatgggcagagaata
tctcagctgctgattactcacaatgaccagttcgtggtctctctctgtgaggaaaatgcc
tccagggtttggagactggccacgggccacagggtatgcaacatcctgaccactctgcag
aacgccttcataacctctgcaaataccttcgtggtgggcatgaccaaaagcaaggtgctg
gcagtcagtctttggacgggaagcatcaccaagaaggtctgctgcgaagacggcaccacc
atcgtgaattttaaattgatccccgattgtccggacatcattgtgtttatcacgtcagcc
gagacggtgaatatctggagtctgacagatgaagtgatctgtcgccgtgtgcaacttcca
aacaacttcctgaaaaatctagaggattttgaaatttcccccaatggaaagctaggcatt
atttccaggggagatgaaaatatcaacgtgctggatttacacagcggtaaattacgggtg
gtccacgcctctggggtcatctggaggcacaggttgtctcgagacggtcgctacctggta
tacatttgtttccgaaacggggaggaagaggatgaaaatggtgcgatatccagtttgatt
gtcatgagactggccgatggcaaaaatatcggtgcttgctccctctacaaaactccaact
tttcttgccctctcccagcggcacctgaacatcattgtgggttttgacgacggcagtata
gggatatacacggtggtggaccgcgtagatgctgcactgaaaattaaaatagccacttca
aatagcagacaaattttcaataatgcgacacagacatccaggccaaagtgtaatagttac
tgttttaaaatgtctgtggattgcttatggagagagtccactgaggtctttgcaagagac
agtcccatcacagtgagtgactccatggagcccaacgaggcgacgccctccaagaaacac
aactcttgctatgaccgggtgtgctctgccctggaatccaggggccacagctatgcccct
gacaactga
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