Phocoena sinus (vaquita): 116754365
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Entry
116754365 CDS
T07759
Symbol
USP38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38 isoform X1
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psiu01002
]
116754365 (USP38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116754365 (USP38)
Enzymes [BR:
psiu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116754365 (USP38)
Peptidases and inhibitors [BR:
psiu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116754365 (USP38)
Ubiquitin system [BR:
psiu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116754365 (USP38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
HPF1
Motif
Other DBs
NCBI-GeneID:
116754365
NCBI-ProteinID:
XP_032488833
Ensembl:
ENSPSNG00000015085
LinkDB
All DBs
Position
5:complement(116320099..116354505)
Genome browser
AA seq
1041 aa
AA seq
DB search
MDKILEGLVSSSHPLPLKRVIVRKVVESAEHWLDEAQCEAMFDLTTRLILEGQDPFQRQV
GHQVLEAYARYHRPEFESFFNKTFVLGLLQQGYHSLDRKDVAILDYIHNGLKLIMSCPSV
LDLFSLLQVEVLRMVCERPEPQLCARLSDLLTDFVQCIPKGKLSITFCQQLVRTIGHFQC
VSTQEKELREYVSQVTKVSNLLQNIWKAEPSTLLPSLQEVFASISSTDASFEPSVALASL
VQHIPLQMITVLIRSLTTDPNVKDASMTQALCRMIDWLSWPLAQHVDTWVIALLKGLAAV
QKFTILIDVTLLKIELVFNRLWFPLVRPGALTVLSHMLLSFQHSPEAFHLIVPHVVNLVH
SFKSDGLPSSTTFLVQLTELIHCMMYHYSGFPDLYEPILEAIKDFPKPSEEKIKLILSQS
AWTSQSNSLASCLSRLSGKSETGKTGLINLGNTCYMNSVIQALFMATDFRRQVLSLNLNG
CNSLMKKLQHLFAFLAHTQREAYAPRIFFEASRPPWFTPRSQQDCSEYLRFLLDRLHEEE
KILKVQSSHKLSESLGCSETSLQEVANKAAVLTETPCTSDSEKTLIEKMFGGKLQTHICC
LNCRSTSQKVEAFTDLSLAFCPSSSMENLSFQEPASSPSTQDGGLMQASVPGPSKEPGVC
NPSTAAFACYSAVNERMVDSPDEFRCSEDTSVPNDSSKMLVNKDVPQKAGGETTSSVTDL
LNYFLAPEILTGDNQYYCENCASLQNAEKTMQITEEPEYLILTLLRFSYDQKYHVRRKIL
DNVSLPLVLELPVKRTTSFSSLSESWSLDVDFTDISENLAKKLKPSGTEEACSPKLVPYL
LSSVVVHSGVSSESGHYYSYARNITGTESSYQMCHQPETLTLASSQSHLLGRDSPSAVVE
QDLENKEMSKEWFLFNDSRVTFTSFQSVQKITSRFPKDTAYVLLYKKQNSTNGLNGNNST
TGLWVNGDPPLQKELMDAITKDNKLYLQEQELNARARALQAASASCSFRPNGFDDNDPPG
SCGPTGGGGGGGFNTVGRLVF
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggacaagatcctggagggcctggtgagttcttcgcacccgctgcccctcaagcgggtg
atcgtgcggaaggtggtggagtcggcggagcattggctggacgaggcgcaatgcgaggcc
atgtttgacctgacgacgcggctcatcctggagggccaggacccctttcagcggcaggtg
ggccatcaagtgctggaggcctacgcgcgctaccatcggccagagttcgagtccttcttc
aataagacgttcgtgctgggcctcctccaacagggctaccactcgctggacaggaaggac
gtagccatcctggactacattcacaacggcctgaagctgatcatgagctgcccgtcggtg
ctggacctcttcagcctgctgcaggtggaggtgctgcggatggtgtgtgagaggccggag
ccgcagctttgcgcccgactgagcgacctcctgaccgacttcgtgcagtgcatccccaaa
gggaaattgtccatcaccttctgccaacagctggttcgaacgataggccacttccagtgc
gtgtccacccaggagaaagagctgcgggaatatgtctcacaggtgacaaaagtgagtaac
ttgctccagaacatctggaaggccgagccctccaccttgctgccttccctgcaagaagtt
tttgcaagcatttcttccacagatgcatcatttgaaccttctgtggcattggcaagcctt
gtgcagcacattcctcttcagatgataacagttctcatcaggagccttactacagatcca
aatgtaaaagatgcaagtatgacccaagctctttgcagaatgattgactggctctcctgg
ccgttggctcagcatgtagacacatgggtgattgcactcctgaaaggactggcagctgtc
cagaagtttactattttgatagatgttactttactgaagatagaactggtttttaatcgg
ctttggtttcctcttgtgagacctggtgctctcacagttctttctcacatgctgcttagt
tttcagcattctccagaggcgttccatttgattgttcctcatgtagttaatttggttcac
tccttcaaaagtgatggtctgccttccagtacaaccttcctagtgcaattaacagaactg
atacactgtatgatgtatcattattctggatttccagatctctacgaacctatcctggaa
gcaataaaggattttcctaagcccagtgaagagaagattaaactgattctcagtcaaagt
gcctggacttctcaatccaattctttggcatcttgcttgtctagactttctggaaaatct
gaaactgggaaaactggtcttattaatctagggaatacatgttatatgaacagtgttata
caagcattgtttatggccacagatttcaggagacaagtattatctttaaatctaaatggg
tgcaattcgttaatgaaaaaattacagcatctttttgcctttttggctcatacacagaga
gaagcatatgcacctcggatattctttgaggcttccagacctccatggtttacccccaga
tcacaacaagactgttctgaatacctcaggtttctactagacaggctccatgaagaagaa
aagatcttgaaagttcagtcctcacacaagctttctgaaagtctcgggtgcagtgaaact
tctttacaagaagtagccaataaggcagctgtactaacagagaccccttgcacaagtgat
agtgagaagacattaatcgaaaaaatgtttggaggaaaactacaaactcacatatgttgt
ttgaactgcaggagtacctcacaaaaagtggaagcctttacagatctttcacttgccttt
tgtccttcctcttctatggaaaacttgtcttttcaagaaccggcatcatcacccagtaca
caagatggtggtctaatgcaggccagtgtacctggtccttcaaaagaaccaggagtctgt
aatccatcaacagctgcctttgcctgttactcagctgtgaatgaaagaatggtggacagt
cctgatgaatttcgctgtagtgaagacacttctgtccctaatgactctagcaagatgctt
gttaataaagatgtacctcagaaagcaggaggtgaaaccacatcttcagtaactgactta
ctaaattattttttggctccagagattcttactggtgacaaccaatattattgtgaaaac
tgtgcctctctgcagaatgccgagaaaactatgcaaatcacggaggaacctgaatacctt
attcttactctcctaagattttcatatgatcagaagtatcatgtgagaagaaaaatccta
gacaatgtgtcactgccactggttttggagttgccagttaaaagaactacttctttctct
tcgttgtcagaaagttggtctctagatgttgacttcactgatattagtgagaatctagct
aaaaaattaaagccttctgggactgaagaagcttgctccccaaaattggtgccctatcta
ttgagttctgttgtcgttcactctggtgtatcctctgaaagcggacattactattcttat
gccagaaacatcacaggtacagagtcctcataccagatgtgccaccagcccgaaactctg
acattagcctcctcccagagtcatttattagggagagatagtcccagtgcagttgttgaa
caggatttggaaaataaggaaatgtcaaaagagtggtttttatttaatgacagcagagtg
acgtttacttcatttcagtcagtccagaaaattactagtaggtttcctaaggacacagct
tatgtgctgttgtataaaaaacagaacagcactaatggtttaaatgggaataattcaacc
actggactctgggtaaatggagacccacctctacagaaagaactaatggatgctataaca
aaagacaataaactatatttacaggaacaagagctgaatgctcgagcccgggccctacaa
gctgcatctgcatcctgttcatttcggcccaatggatttgacgacaatgatccaccagga
agctgtggaccaactggtggtgggggtggaggagggtttaatacagttggcagactcgta
ttttga
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