Phocoena sinus (vaquita): 116754366
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Entry
116754366 CDS
T07759
Symbol
HMX1
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox protein HMX1
KO
K09349
homeobox protein Nkx-5
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psiu03000
]
116754366 (HMX1)
Transcription factors [BR:
psiu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
116754366 (HMX1)
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Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
116754366
NCBI-ProteinID:
XP_032488836
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Position
5:2814837..2819609
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AA seq
354 aa
AA seq
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MPDELTEPGRATPARASSFLIENLLAAEAKGAGRAAQGGGGREDEEEDDDDPEDEDAEQA
RRRRRLQRRRQLRAGSGPSGDARARALLGPGALGLGPRPPPGPGPPYALGCGGATRWYSR
SHGGYGGGLSPDTSDRDSPETGEEMGRAEGAWPRGPGPGAVQREAAELAARGPAAGAEEA
ADLAEARAAAAAGEARGGGGXGGGRKKKTRTVFSRSQVFQLESTFDLKRYLSSAERAGLA
ASLQLTETQVKIWFQNRRNKWKRQLAAELEAASLSPPGAQRLVRVPVLYHESPPAAAAAA
AAGAPAALPFPLAPAAPAPPPPLLGFSGALAYPLAAFPAAASVPFLRAQMPGLV
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgccggacgagctgacggagcccgggcgcgccacgccggcccgcgcctcctccttcctc
atagagaacctgctggcagccgaggccaagggcgctgggcgcgcggcccagggcggcggc
ggccgcgaggacgaggaggaggacgacgacgaccctgaggacgaggacgcggagcaggcg
cggcggcggcggcggctgcagcggcggagacagctgcgcgcgggctccgggccgagcggg
gacgcgcgggcccgggcgctgcttgggccgggcgcgctgggcctcggtccccggccgccc
ccgggtcccgggccgccctacgctctgggctgcggaggcgccacgcgctggtactcgcgg
tcgcacggaggctacggaggcggcctcagccctgacaccagcgaccgggactcaccggag
acgggcgaggagatgggccgcgcagagggcgcctggccgcggggccccgggccgggagcg
gtgcagcgggaggcggcggagctggcggcgaggggcccggcagccggcgcggaggaggcg
gcggatctggccgaggcccgggcggcggcggcggcgggggaggcgcgcggcggcggtggg
nngggcggtggccgcaagaagaagacgcgcacggtcttctcgcgcagccaggtcttccag
ctcgagtccaccttcgacctgaagcgctacctgagcagcgccgagcgcgccggcctggcc
gcctccctgcagctcaccgagacgcaggtcaagatctggttccagaaccgccgcaacaag
tggaagcggcagctggcggccgagctggaggcggccagcctgtctccgccgggcgcgcag
cgcctggtccgcgtgccggtgctctaccacgaaagccccccggccgccgccgccgccgcc
gccgccggagctcccgccgcgctgcccttcccgctggcgcccgccgcgcccgccccgccc
ccgccgctgctgggcttctccggggccctcgcctacccgctggccgccttcccagccgcc
gcctccgtgcccttcctgcgggcgcagatgcccggcctggtgtga
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