KEGG   Phocoena sinus (vaquita): 116754381
Entry
116754381         CDS       T07759                                 
Name
(RefSeq) LOW QUALITY PROTEIN: proliferating cell nuclear antigen-like
  KO
K04802  proliferating cell nuclear antigen
Organism
psiu  Phocoena sinus (vaquita)
Pathway
psiu03030  DNA replication
psiu03410  Base excision repair
psiu03420  Nucleotide excision repair
psiu03430  Mismatch repair
psiu04110  Cell cycle
psiu04530  Tight junction
psiu05161  Hepatitis B
Brite
KEGG Orthology (KO) [BR:psiu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    116754381
   03410 Base excision repair
    116754381
   03420 Nucleotide excision repair
    116754381
   03430 Mismatch repair
    116754381
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    116754381
  09144 Cellular community - eukaryotes
   04530 Tight junction
    116754381
 09160 Human Diseases
  09172 Infectious disease: viral
   05161 Hepatitis B
    116754381
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psiu03032]
    116754381
   03400 DNA repair and recombination proteins [BR:psiu03400]
    116754381
DNA replication proteins [BR:psiu03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    116754381
DNA repair and recombination proteins [BR:psiu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     116754381
   MMR (mismatch excision repair)
    Other MMR factors
     116754381
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    116754381
SSDB
Motif
Pfam: PCNA_C PCNA_N Rad1 Rad9 Hus1
Other DBs
NCBI-GeneID: 116754381
NCBI-ProteinID: XP_032488852
Ensembl: ENSPSNG00000001811
LinkDB
Position
5:complement(96643391..96644175)
AA seq 261 aa
MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHDSLAQLTLRSEGFDTY
RCDSNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTMALVFEAPNQEKVSDYEMKLMD
LDVEQLGIPEQEYSRVVKMPSGEFARICRDLSHIGDALVISCAKDGVKFSASGELGNGNI
KLSQTSNVDKEEEAVTIDTNEPVQLTFALRYLNFFTKATPLSPTVTLSMSADVPLVVEYK
IADMRHLKXYLAPKIEDEEGS
NT seq 786 nt   +upstreamnt  +downstreamnt
atgttcgaggcgcgcctggtccagggctccatcttgaagaaggtgcttgaggcgcttaag
gacctcatcaacgaggcctgctgggacatcagctcgagcggcgtgaacctgcagagcatg
gactcgtcccatgactctttggcgcagctcaccctgcgctccgagggcttcgacacgtac
cgctgcgacagcaacttggccatgggcgtgaaccttaccagcatgtccaaaatactgaaa
tgtgctggcaatgaagacatcattacactaagggctgaagataacgcggacaccatggca
cttgtatttgaagctccaaatcaagaaaaggtttcagactatgaaatgaagttaatggat
ttagatgttgaacaacttggaattccagaacaagagtacagccgtgtagtaaagatgcct
tctggtgaatttgcacgtatatgccgagatctcagtcatattggagatgctcttgtaatt
tcctgtgcaaaagatggagtgaaattttctgcaagtggagaacttggaaatggaaatatt
aagttgtcacaaacgagtaatgttgataaagaagaggaggctgttaccatagacacgaat
gaaccagttcagctaacttttgcactgaggtacctgaacttctttacaaaagccactcca
ctctctcctacagtaacactcagtatgtctgcagatgtaccccttgttgtagagtataaa
attgctgatatgagacatttaaagntatatttggctcccaagatcgaggatgaagaagga
tcttag

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